KEGG   Pelodiscus sinensis (Chinese soft-shelled turtle): 102461734Help
Entry
102461734         CDS       T02980                                 

Gene name
HDAC4
Definition
(RefSeq) LOW QUALITY PROTEIN: histone deacetylase 4
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
pss  Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04371  Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:pss00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    102461734 (HDAC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pss03036]
    102461734 (HDAC4)
Enzymes [BR:pss01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     102461734 (HDAC4)
Chromosome and associated proteins [BR:pss03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     102461734 (HDAC4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Hist_deacetyl HDAC4_Gln
Motif
Other DBs
NCBI-GeneID: 102461734
NCBI-ProteinID: XP_006127520
Ensembl: ENSPSIG00000018148
LinkDB All DBs
Position
Unknown
AA seq 1084 aa AA seqDB search
MSSQSHPDGLSGRDQPVELLNPPRVNHMPSSVDVNTALPLQVAPASVPMDLRLDHQFSMP
VTEPTLREQQLQQELLALKQKQQIQRQILIAEFQRQHEQLSRQHEAQLHEHIKQQQEMLA
MKHQQELLEHQRKLEQHRQEQELEKQHREQKLQQLKNKEKGKESAVASTEVKMKLQEFVL
SKKKALAHRNLNHCISSDPRFWYGKTQHSSLDQSSPPQSGVSGTYNHPVLGMYDSKDDFP
LRKTASEPNLKLRSRLKQKVAERRSSPLLRRKDGPVVTALKKRPLDVTDSACNSAPGSGP
SSPNNSSNNISAENGITGSVTSIQAETSLAHRLANREGSVTQLPLYTSPSLPNITLGLPA
TGPASGGSGQQDAERLAIPTLQQRLSLFPGTHLTPYLSTTALERDGGTSHNSLLQHMVLL
EQPTAQTPLVTGLGALPLHAQSLVGAERVSPSIHKLRQHRPLGRTQSAPLPQNAQALQQL
VIQQQHQQFLEKHKQQFQQQQLHLNKMIPKPPEPARQPESHPEETEEELREHHALLEEPY
GDRVASQKEVQGLANMVTVKQEPIESDEEETELPLELEPGQRQAEQELLFRQQALLLEQQ
RIHQLRNYQASMEAAGIPVSFGGHRPLSRAQSSPASATFPMSVQEPPTKPRFTTGLVYDT
LMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRSKCEVILRRKQTLEELQTVHSEAHA
LLYGTNPLNRQKLDSKKLLGSITSMFVRLPCGGVGVDSDTIWNEVHSSGAARLAVGCVIE
LVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLSVSKILIVDWD
VHHGNGTQQAFYSDPNVLYISLHRYDDGNFFPGSGAPDEVGTGAGVGFNVNMAFTGGLDP
PMGDAEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTKQL
MGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRANANAVHSMEKV
IEIHSKYWHSLQRYASTVGYSLVEAQKCETEEAETVTAMASLSVGVKPADKRSDDEPMEE
EPPL
NT seq 3255 nt NT seq  +upstreamnt  +downstreamnt
atgagctcccaaagccatccagatggactttctggccgagatcagccagtagagctgcta
aatccacctagagtgaaccatatgcccagttctgtggatgtgaacacagcactgcctttg
caagttgcaccagcttcagtccccatggatctccgcttggaccaccagttttccatgcca
gtgacagaacctacactccgagaacagcagctccagcaggaactcttggctctcaagcaa
aaacaacaaattcagagacaaatccttatagccgagtttcagaggcagcatgagcaactc
tcccgtcagcatgaggcccagctacatgagcatatcaaacagcagcaggaaatgctagca
atgaaacaccagcaggagctcttggagcaccagcgaaagttggagcagcatcgccaggaa
caagagctggagaagcagcatagagaacagaaactacagcagctcaaaaacaaagagaaa
ggcaaagaaagtgctgtggcaagcacagaggtaaaaatgaaattacaggagtttgtttta
agtaagaagaaagctttggcacaccggaatctcaaccattgcatttctagtgatccccgc
ttctggtatgggaaaacgcagcacagttctcttgaccagagttctccccctcaaagtgga
gtatctggcacctacaatcatcctgtcctggggatgtatgattccaaagatgactttcca
ctcagaaaaacagcgtctgaacctaatctgaagttacgatccagattaaagcagaaagtt
gctgaaaggcggagcagccccctgttacgcaggaaagatggccctgtggttactgctctt
aagaagcgtcccctggatgtcacagactctgcctgcaacagtgctcctggatctggtccc
agctcaccaaacaacagctctaacaacataagtgctgagaatggaattacaggatcagtc
acgagcattcaggcagagaccagcctggctcaccgcctagcgaatcgtgaaggctcagta
acccagcttcctctctacacgtctccttccctgcccaacataacgttagggctgcctgcc
actgggcctgccagtggggggtcaggacagcaggatgccgaaagacttgctattcccacc
ctacaacagcggctttccttgtttcctggcacccacctcactccgtatttgagcactaca
gcgttggaaagagatgggggaacgtcacacaactctcttctgcaacacatggtcttactg
gaacagccaactgcacagacgcccttagtcacaggcttgggggcactccccctccatgca
cagtctctggttggtgcagaacgggtctccccttccatacacaaactccggcaacaccgc
cccctggggcgcacgcagtcggctccccttccccagaacgctcaggccctccagcagtta
gtgatccagcaacagcaccagcagttcctggagaaacacaaacagcagttccagcagcag
cagcttcacctgaacaagatgatccccaagccgcccgagccagcccgccagcctgaaagc
caccctgaggagacggaagaggagttgcgagagcaccacgcacttttggaggagccgtat
ggcgaccgagtcgcgagccaaaaggaggtgcaagggctggccaacatggtgacggtgaag
caagagcccattgagagtgatgaagaggagacggagctgccactggagctggagccaggg
cagaggcaagctgagcaggagctgctcttccggcagcaagccctcctgctggagcagcaa
cgcattcaccagctgagaaactaccaggcctccatggaggcagctggcatcccagtgtct
tttggcggacatcggcctctgtcccgcgcccagtcctcacctgcgtctgccaccttcccc
atgtctgtacaggagccccccactaagccaaggttcaccacaggcctggtctatgatacc
ttgatgctgaaacaccagtgtacctgtgggaacacaaacagccatccagagcacgcaggg
agaatccagagcatctggtcccggctccaggagacaggcctccgtagcaagtgtgaggta
atattgaggagaaaacaaactctggaagagctacagactgttcactcggaggcacatgcc
ctgctgtacggcacaaaccctttgaacagacagaaactggacagcaagaaactgctaggt
tccatcacatccatgtttgtcaggctcccttgtggtggtgttggagttgacagcgacaca
atttggaatgaagttcattcgtctggtgctgctcgcctggccgttggctgtgtcatcgaa
cttgtttttaaagtggccacaggagagctgaagaatggatttgctgttgttcgaccccca
ggtcatcatgctgaagagagtacgcccatgggcttctgctattttaattccgtggcaatt
gcagccaagcttctccagcagagactcagcgttagcaaaatccttatagtggactgggac
gtgcaccatgggaatggaactcagcaggctttctacagtgacccaaacgttctgtacatt
tctctacatcgctacgatgatggaaacttctttccaggcagtggtgctcctgatgaggtc
ggcaccggcgcaggcgttggtttcaatgtcaacatggcctttactggtggcctcgacccg
ccgatgggagatgccgaatatctgactgctttcagaacggtagtaatgccaattgccaat
gagtttgccccagatgtggtgctggtctcatctggttttgatgcagtggaaggccatcct
acgccccttggaggatataatctgtcagcaaaatgctttgggtacctgacgaagcagctg
atgggattggccggaggtcgaattgttctggccctcgaaggaggtcatgacctgacagcc
atttgtgatgcgtctgaggcatgtgtttctgctttgctgggaaacgagcttgatcctctt
ccggaaaaagttttgcagcagcgagcaaatgctaatgcagtgcattccatggaaaaagta
attgagatacacagcaagtactggcattcactccaacgctatgcctccaccgtgggctac
tccttggtcgaggcccagaagtgtgagacggaagaagcagaaacggtcacagccatggcg
tcgctgtcagtgggggtgaagccagctgataagagatcagatgatgagcccatggaagag
gagcctcccctgtag

DBGET integrated database retrieval system