Pseudomonas syringae pv. tomato DC3000: PSPTO_2509
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Entry
PSPTO_2509 CDS
T00118
Name
(GenBank) penicillin-binding protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst00550
Peptidoglycan biosynthesis
pst01100
Metabolic pathways
pst01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PSPTO_2509
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PSPTO_2509
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pst01011
]
PSPTO_2509
Enzymes [BR:
pst01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PSPTO_2509
Peptidoglycan biosynthesis and degradation proteins [BR:
pst01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
PSPTO_2509
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
MAP
Motif
Other DBs
NCBI-ProteinID:
AAO56016
UniProt:
Q882W3
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All DBs
Position
2770328..2772217
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AA seq
629 aa
AA seq
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MPNPIPLKDHEKETRLVNQRLIACAVLVAVLAACLIARMYFLQVTEFDYHSTISENNRVH
VLPIPPERGLIFDRNGEVLADNRPSFNLTLTRERAGDWHKVIDELMTLLELPDEDRILFD
KELKQVRHPFEPATLLYELTEQQIAILAVNQYLLPGVDVAAQFVRHYPLGDHFAHSIGYV
GRINEKEASHLDNEYRGTQSIGKTGIERFYESELHGHVGYEEVETNAQGRVLRVLKHTDP
IPGKNITLSLDAHLQAAAENALGDRRGSVVALDPETGEVLAMVSKPSFDPNLFVTGISFK
QYAALRDSIDRPLFNRVLRGLYAPGSTVKPEVAIAGLDSGVVNASTKVFDPGYFQLPDFD
HKYRNWNHSGDGWVDMDTAIMRSNDTYFYTVAHKLGIDRLHDYMTMFGIGQKVSLDMFEE
SAGLMPSREWKRATRRQAWFPGETVILGIGQGYMQVTPLQLAQATSLIASKGVWHRPHLA
MEVGHEVPVDEHPMPNIVLRDPNEWNQVNTGMQMVMHDPRGIARDAAKGAQYRIAGKSGT
AQVVAIKQGERYNRLKTLERNRDNALFVGFAPADHPKIVVSVTIENGEAGGRVAGPVVRE
ILDAWLLDSEGKLKPQYAVPAKATGNPHA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgcccaatccaatccccctgaaagaccacgaaaaagagacgcggctggtcaaccagcgt
ctgatcgcctgtgcggtactggtcgctgtgctggctgcctgcctgatcgcacgcatgtac
tttctgcaagtcaccgagtttgactaccactcgaccatctctgaaaacaaccgggtgcac
gtgctgccgatcccgcccgagcgcggtttgatcttcgaccgtaacggcgaggtactggcc
gacaaccgccccagtttcaacctgaccctgacccgcgagcgcgccggggactggcacaag
gtgattgatgagctgatgaccctgctggaactgcccgacgaggaccggattctgttcgac
aaggaactcaagcaagttcgccacccgttcgagcccgcgaccctgctgtatgaactgacc
gaacagcagatcgccatattggcggtcaatcaatacctgctgccgggcgtagacgtggcg
gcgcagttcgttcggcactatccgctgggcgatcattttgcccattcgattggctatgtc
gggcgcatcaacgaaaaagaggcgtcgcacctcgacaacgaataccgcggcacgcaatcc
atcggcaagaccggcatcgaacgcttctacgagtccgaactgcatggccatgtaggctac
gaagaagttgaaaccaacgcgcaaggccgtgtgttgcgggtgctgaaacacactgatccg
ataccgggcaagaacatcacgctgagcctggatgcgcacttgcaggctgcggcggaaaac
gcgctgggtgaccggcgcggttcggtggttgcactggacccggaaaccggcgaagtgctg
gcgatggtcagcaaaccgagcttcgaccccaacctgttcgtcaccggtatcagcttcaag
cagtacgccgcgctgcgcgattccatcgaccggccgctgttcaaccgggtgctgcgcggc
ctttatgcaccgggctcgacagtcaagcctgaagtcgcgattgccggcctggacagcggc
gtggtcaatgcatcgaccaaggttttcgatccgggctatttccagctgccggacttcgat
cacaagtaccgcaactggaaccacagtggtgatggctgggtggacatggacaccgcgatc
atgcgctccaacgacacctacttctacaccgtggcgcataagctgggcattgatcgcctg
catgactacatgaccatgttcggcatcggccagaaggtttcgctggacatgttcgaggag
tccgccgggctgatgccgtcccgcgagtggaagcgcgcgacgcggcgccaggcgtggttc
cccggcgaaaccgtgatcctcggtatcggccagggctacatgcaggtcacgccgttgcaa
ctggcgcaggccacctcattgatcgccagtaaaggtgtctggcaccgtccgcacctggca
atggaagtgggccacgaggtgcctgtcgatgagcacccgatgccaaacatcgtgctgcgc
gaccccaacgaatggaatcaggtcaataccggcatgcagatggtcatgcacgacccgcgc
ggcatcgcccgtgacgccgcaaagggcgcgcaataccgcatcgccggcaagagcggtacg
gcgcaggtggtcgcgatcaagcagggcgagcgttacaaccgtctgaagacgctggagcgt
aaccgcgacaacgccttgttcgtcggttttgccccggctgatcatccgaaaatcgtggtg
tcggtgaccatcgagaacggcgaggcgggtggtcgtgtcgcagggccagtggttcgggaa
attctcgacgcctggctgctcgacagcgagggcaagctcaagccgcaatatgcagtcccc
gccaaggcaacgggcaacccgcacgcctga
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