Pseudomonas syringae pv. tomato DC3000: PSPTO_4095
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Entry
PSPTO_4095 CDS
T00118
Symbol
hrpA
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent helicase HrpA [EC:
3.6.4.13
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
PSPTO_4095 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_19
AAA_22
nSTAND3
T2SSE
AAA_25
NACHT
SRP54
Motif
Other DBs
NCBI-ProteinID:
AAO57551
UniProt:
Q87XT1
LinkDB
All DBs
Position
complement(4611940..4615851)
Genome browser
AA seq
1303 aa
AA seq
DB search
MTDESPSIDQLLKNLDHAMISERHRLRRQLHELRKKPDEAKLAQWVARVQASCAQVTARR
ESVPAMRYDDNLPIAAKRDEIKEALLKHQVLIIAGETGSGKTTQLPKICLEIGRGQHGLI
GHTQPRRIAARSVASRVAEEIGTPLGALVGYQVRFEDQSDSNTLIKLMTDGILLAETQND
RFLERYDTIIVDEAHERSLNIDFLLGYLKTLLPRRPDLKVIITSATIDLQRFSEHFNDAP
VIEVSGRTFPVDLWYRPLTSEQDEEGNSVEEDLTVDQAILATLDELAAFERSERKSPGDV
LVFLPGEREIRDAAEVLRKAQLRHTEILPLYARLSPAEQQRIFQSHPGRRVVLATNVAET
SLTVPGIRYVIDTGTARISRYSYRAKVQRLPIEAVSQASANQRKGRCGRVEPGLCVRLYS
EEDFNGRPEFTDPEILRTNLAAVILQMLHLRLGEITDFPFIEPPDGKAISDGFNLLQELS
AVNRENQLTPLGRQLARLPVDPRMGRMLLEAAKQGSLQEVLIVASAMSVQDVRERPPERQ
QAADQAHAQWKDADSDFAGLVNLWRGFEEQRQTLTASPLRNWCRRNFLNYLRLREWRDSH
RQLSLICRDLQLTVNKEPADYPKFHKAILSGLLSQIGQKADEGDYLGARQRRFWIHPSSG
LGKKRPQWLMAAELVETTKLYARMVAKIDSDWIEPLAGHLIKKNHFEPHWEKKRGQVVAF
EQITLFGLIVVGRRPVHYGPVDPQVSRELFIREGLVRGEILSRAKCLSANTRLLEQLDEL
EAKARRRDILADEDTLYSFYEARIPAQIHQTATFDSWYKTESQNNPQLLIMREEDVLARE
ASEVTAAQYPDTLNLGDLSLSLSYHFEPNHPRDGVTLRVPAPLLLSLPAERLEWLVPGLL
ETKCIALVRNLPKAVRKNFVPVPDFIKAALQRLTFGEGSLPQALGRELLRMTGVRVSDEA
WAEAAQQLEGHLRMNLEIVDGSGKFLGEGRDLAELTARFAEASQAALAVPQTAKSQQPVQ
AKAFAAVAQKTQQNIAGLSMTVYPALVEEGGAVKEGRFSTQAEAEYQHRRALQRLLLQQL
AEPAKFLRNKLPGQTELALLHRELGRIDALVEDILLASLDSCVLEGEAELPRDGAGLLSL
AERKRADWTEHAERFAKLALEILKLWHGLQKRFKGKIDLSQAVALNDIKAQLSKLVYPGF
VRETPAAWLKELPRYLKAIEMRLEKLPGQVQKDRVWSIELAGLWAQYQARADKHAQEGKR
DPELALYRWWMEEYRVSLFAQQLGTKMPVSDKRLSKQWSQVDS
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgaatcgccttctatcgaccaactcctgaaaaacctcgaccacgcgatgatc
agcgaacgccatcgtttgcgccgtcagttgcatgagctgcgcaagaagcctgacgaggcg
aagctggcgcagtgggtggcacgggttcaggcgtcctgcgctcaggtgacggcgcggcgc
gagagcgtgccggcgatgcgttatgacgacaatttgcccatcgccgccaagcgcgacgag
atcaaagaagcgctgctcaagcatcaggtgctgatcattgccggtgagaccggttcgggt
aaaaccacgcagttgccaaagatctgcctggaaatcggtcgcggtcagcacggtctgatc
ggccatacccagccgcgccggatcgccgcacgcagcgtggccagccgggttgccgaggaa
atcggcacgccgctgggggcgctggtcggttatcaggtacgtttcgaggatcagagcgac
agcaacaccctgatcaagctgatgactgacggtatcttgctggccgaaacccagaatgac
cgctttcttgagcgctacgacacgatcatcgtcgacgaagcccacgagcgcagcctgaac
atcgactttctgctcggttacctgaaaaccctgctgccgcgccgcccggacctgaaagtc
atcatcacctccgcgaccatcgacctgcagcgcttttccgagcacttcaacgatgcgccg
gtgatcgaagtatcgggtcgtaccttccccgtggacctctggtatcgcccgctgaccagc
gagcaggacgaggagggcaacagcgttgaagaagacctgactgtcgatcaggcgattctg
gccacgctggacgaactggcagcttttgaacgcagcgagcgcaaaagccccggcgatgtg
ctggtgtttctgcccggcgaacgcgaaattcgcgatgcggccgaggtgctgcgcaaggct
cagttgcggcacaccgagattttgccgttgtatgcacgtctatcgccggccgaacagcag
cgtatttttcagtcgcatcccggtcgtcgcgtggtgctggcgaccaacgtcgccgaaacc
tcgctgaccgtgccgggcattcgttacgtgatcgataccggtacggcgcgcatcagccgc
tacagctatcgcgccaaggtccagcgcttgccgatcgaggccgtttcccaggccagcgcc
aatcagcgcaagggccgttgcggacgtgtcgagccgggcttgtgcgtgcgcctgtacagc
gaggaggatttcaacggtcggcctgaattcactgacccggaaatcctgcgcaccaacctg
gcggcggtcatcctgcagatgctgcacctgcgcctgggcgagatcaccgactttccgttt
atcgagccacccgacggcaaggcgatcagcgacggcttcaacctgttgcaggaactgtcg
gcggtcaatcgcgaaaatcagctgaccccgctgggtcgccaactggcgcgtctgccagtg
gacccgcgcatgggtcgcatgctgcttgaagccgcgaaacagggcagccttcaggaagtg
ctgatcgtcgccagcgccatgtccgtgcaggacgtgcgtgagcgcccgcccgagcgtcag
caggcggccgatcaggcccatgcacaatggaaggacgccgactcggacttcgccgggctg
gtcaatctgtggcgcggttttgaagagcagcgccagaccctgaccgccagcccgctgcgc
aactggtgccggcgcaattttctgaattacctgcgcctgcgtgagtggcgtgactctcat
cggcagttgagcctgatctgtcgcgacctgcaactgacggtaaacaaggagccggccgat
tacccgaaattccacaaggccattctttccggcctgctaagccagatcggacaaaaggcc
gacgaaggcgattaccttggcgcgcggcagcgacgcttctggattcacccctcctcaggt
ctgggcaagaagcgcccgcagtggctgatggctgccgaattggtggaaaccaccaagttg
tatgcgcgcatggtggccaagatcgattcggactggatcgagccgctggccgggcacctg
atcaagaagaatcatttcgagccgcattgggagaaaaagcgcgggcaggtggtcgcgttt
gaacagatcaccctgttcggcctgatcgtggtcggtcgtcgcccggtgcattacgggcct
gtcgacccgcaggtgtcacgcgagctgttcatccgcgaaggcctggtgcgtggcgaaatc
ctctctcgggccaagtgcctgagcgccaatacacgcttgctggaacagctcgacgagctg
gaagccaaggctcgccgtcgcgatattctggccgacgaagacaccctgtacagcttctac
gaagcgcgaattccggcccagattcaccagaccgccacgttcgacagctggtacaagacc
gaaagccagaacaacccgcagctgctgatcatgcgcgaagaagacgtgttggcccgtgag
gccagcgaagtgaccgccgcgcagtacccggacacgctgaatctgggcgatttgagcctg
tcgctgagttaccactttgagcccaaccacccgcgtgacggcgtgacgctgcgtgttccg
gcacccttgctgctgtctttgcctgccgagcgtctggagtggctggtgccggggttgctg
gaaaccaagtgcatcgcgctggtacgcaacctgcccaaggcggtgcgcaagaactttgtg
ccggtcccggatttcatcaaggccgcgctgcaacgcctgacctttggtgaaggctcgttg
cctcaggcgctgggccgcgagctgttgcgcatgaccggcgttcgggtcagcgacgaggcc
tgggccgaagccgcgcagcagcttgaaggccatttgaggatgaacctggaaatcgtcgat
ggcagcggcaagtttctgggtgaagggcgtgatctggccgaactgaccgcacgcttcgcc
gaggcgagtcaggctgctctcgcggtgccgcaaaccgcgaaaagccagcaaccggttcag
gccaaggcctttgctgcggtggcacagaaaactcagcagaacatagccgggctgtcgatg
acggtgtatccggcgctggtcgaagagggcggcgcggtcaaggaaggcaggttctctact
caggccgaagccgagtaccagcaccgacgcgccttgcaacgcttgctgttgcaacagttg
gcggaaccggcgaagtttctgcgcaacaaactgccgggccagaccgagctggccttgctg
caccgcgaactggggcgtattgatgcgctggtcgaagacattctgctggccagtctcgac
agttgcgtgctggaaggtgaggccgagctgccgcgcgacggtgccggcctgctgtcgctg
gcggagcgcaagcgcgccgactggaccgagcacgccgagcggttcgcgaagctggcgctg
gaaatcctcaagctgtggcacggtttgcaaaagcgcttcaagggcaagatcgacctgtct
caggcggttgcgctcaacgatatcaaggcgcaactgagcaaactggtgtatccgggcttt
gtgcgggaaaccccggcggcgtggctcaaagaactgccgcgctacctgaaagccatcgaa
atgcgcctggagaaactgccaggccaggtgcaaaaagaccgggtgtggagcatcgaactg
gcaggtctctgggcgcaataccaggcacgcgccgacaaacacgcccaggaaggcaagcgt
gacccggagctggcgttgtatcgctggtggatggaagagtatcgcgtctcgctttttgct
cagcagttgggcactaaaatgccggtgtcggacaaacggttgagcaagcagtggagccag
gtggatagctga
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