Pseudomonas syringae pv. tomato DC3000: PSPTO_4406
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Entry
PSPTO_4406 CDS
T00118
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst00470
D-Amino acid metabolism
pst00550
Peptidoglycan biosynthesis
pst01100
Metabolic pathways
pst01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PSPTO_4406
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PSPTO_4406
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PSPTO_4406
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pst01011
]
PSPTO_4406
Enzymes [BR:
pst01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
PSPTO_4406
Peptidoglycan biosynthesis and degradation proteins [BR:
pst01011
]
Precursor biosynthesis
Amino acid ligase
PSPTO_4406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
TTL
ATPgrasp_YheCD
ATPgrasp_ST
FOG_N
Motif
Other DBs
NCBI-ProteinID:
AAO57855
UniProt:
Q87WY7
LinkDB
All DBs
Position
complement(4972741..4973700)
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AA seq
319 aa
AA seq
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MTAVARSSLRSTLEPKSFGRVAVLFGGKSAEREVSLNSGNAVLKALLDAGVDAFGIDVGD
DFLQRLVSEKIDRAFIVLHGRGGEDGTMQGLLECLEIPYTGSGVLASALAMDKLRTKQVW
QSLGPATPLHAVLENENDCICAATELGFPLIVKPAHEGSSIGMAKVNSVDELIAAWKAAS
TYDSQVLVEQWIQGPEFTVASLRGQVLPPIGLGTPHSFYDYDAKYLASDTQYRIPCGLDD
AQEQQLKQLAARACDAIGIAGWARTDVMQDAEGKFWLLEVNTVPGMTDHSLVPMAARAAG
LNFQQLVLAILADSVQARG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgttgcccggtcttccctgcgctcgacacttgagccgaaaagcttcggccgt
gtcgccgtgctcttcggtggcaagagtgccgagcgggaagtctccctgaactcggggaat
gcagtgctcaaggcgctgctcgacgctggcgtggatgcgttcggcatcgatgtgggcgac
gacttcctgcagcgactggtcagcgaaaaaatcgaccgtgcgtttattgtcctgcacggc
cgcggcggcgaagacggcaccatgcaagggctgctggaatgtctggaaatcccttacacc
ggcagcggtgtactggcttcggcactggcaatggacaagttgcgcaccaagcaggtctgg
cagagccttggccctgcaacgccgctgcacgccgttctggaaaacgagaacgattgtatt
tgcgcggccacggaactgggcttccctttgatcgtcaaaccggcccatgaaggttcaagt
atcggtatggcgaaggtgaacagcgtcgatgaattgatcgccgcctggaaagctgccagt
acctacgattcgcaagtattagtcgaacagtggattcagggtcctgagtttactgtggcg
tctctgcgtggccaggtgttgcctcccattggcctgggcactcctcacagtttttatgat
tacgacgccaagtacctggcctccgatactcagtaccggatcccgtgtgggcttgacgat
gcacaggaacagcaactcaaacaacttgcagcacgcgcgtgcgacgccatcggcattgca
gggtgggcgcgcacggatgtgatgcaggacgcagagggcaagttctggctgttggaagtc
aataccgtgcccggcatgaccgatcacagtctggtgccgatggcagcacgcgctgccggt
ctgaactttcaacaactggtgttggcgatactagccgacagcgttcaggcgagaggttaa
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