Providencia stuartii BE2467: BGK56_06185
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Entry
BGK56_06185 CDS
T04734
Symbol
ligA
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
psta
Providencia stuartii BE2467
Pathway
psta03030
DNA replication
psta03410
Base excision repair
psta03420
Nucleotide excision repair
psta03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BGK56_06185 (ligA)
03410 Base excision repair
BGK56_06185 (ligA)
03420 Nucleotide excision repair
BGK56_06185 (ligA)
03430 Mismatch repair
BGK56_06185 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psta03032
]
BGK56_06185 (ligA)
03400 DNA repair and recombination proteins [BR:
psta03400
]
BGK56_06185 (ligA)
Enzymes [BR:
psta01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
BGK56_06185 (ligA)
DNA replication proteins [BR:
psta03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BGK56_06185 (ligA)
DNA repair and recombination proteins [BR:
psta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
BGK56_06185 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BGK56_06185 (ligA)
MMR (mismatch excision repair)
DNA ligase
BGK56_06185 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BGK56_06185 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
5_3_exonuc
HHH
RNA_ligase
DZR_2
zf-NADH-PPase
Motif
Other DBs
NCBI-ProteinID:
APG50552
LinkDB
All DBs
Position
complement(1302540..1304555)
Genome browser
AA seq
671 aa
AA seq
DB search
MTTKQHLDTLKQQLRHHEYQYHVLDAPEIPDAEYDKLMEELKAIEAEHPEWITSDSPTQR
VGAAPLAAFDTVRHEIPMLSLDNVFDEESYLAFDKRVRDRLKDQQEQTFCCELKLDGLAV
SLLYENGELVQAATRGDGTVGENITSNVRTIRAIPLRLTGENIPARVEIRGEVFMPQKGF
EALNEEARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFYCYGVGLVEGETLPDTHYE
RLMQFKKWGLPVSEYVQLRTGAQAVLDFYHEIEKARPTLGFDIDGVVIKINDIATQEELG
FVSRAPRWATAFKFPAQEQMTLLKDVEFQVGRTGAITPVARLEPVQVAGVTVSNATLHNA
DEIERLGVHIGDTVVIRRAGDVIPQIVSVVESERPADSREIVFPTHCPVCGSDVERVEGE
AVARCTGGLICGAQRKEALKHFVSRRAMDVDGMGDKIIDQLVEKEYVKNPADLYQLSAGI
LTGLDRMGPKSAQNLVEALNKSKSTTLARFIYALGIREVGEATAANLAAHYGTLEALMAA
DEESLKTVQDVGHVVAKHVVNFFREEHNQTVIQALIDKANIHWPEAVAVDVSTIDSPFAG
KTVVLTGSLSQLTRDEAKDKLVALGAKVSGSVSKKTHLVIAGEAAGSKLAKANELGIPVI
DENELIRLLEA
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgactacaaaacaacatctcgatacactcaaacaacaattacgtcatcatgaatatcaa
tatcatgtattagatgcacctgaaatcccagatgcagaatatgacaaactcatggaagag
ctgaaggctatcgaagcggaacatcctgaatggatcaccagtgactcaccgactcagcga
gtgggtgcggctccattagcggcgtttgacaccgtacgtcatgaaataccgatgttatcg
cttgataacgtatttgatgaagaaagctatcttgctttcgacaaacgcgtgagagaccga
ttaaaagatcagcaagaacaaaccttctgttgtgaattaaaattagatggccttgcggtg
agcttactgtatgagaatggcgaactcgtccaagccgctactcgcggtgatggaactgtg
ggggaaaatattacctctaatgttcgtacaattcgtgctattccacttcgtttaacgggt
gaaaatattcctgctagggtagaaattcgtggtgaagtatttatgccacaaaaaggcttt
gaagcattgaatgaggaagcgcgccgtacaggtggaaaagttttcgctaaccctcgtaac
gcggcagcggggtcattacgccaattagacccacgtattacagcgaaaaggcctttaacg
ttctactgctatggcgtggggctggtggaaggcgaaacactgccagatactcattatgag
cgactgatgcaatttaagaagtgggggttacctgtaagtgagtatgtgcaattacggaca
ggcgctcaggcggtattggacttttatcatgagatagaaaaagctcgcccaacattaggc
tttgatattgatggggtcgtcattaaaattaacgacattgcaacccaagaagagttaggc
tttgtgtctcgggcacctcgttgggcaacggcgtttaagttcccggctcaagagcagatg
acattgctaaaagatgttgaattccaagttggacgtaccggagcaattacgcctgttgca
cgtttggaaccagttcaagttgccggcgtgacagtcagtaatgcgacgctacacaacgct
gatgaaattgagcgcttaggggttcatatcggtgatactgttgtgatccgtcgtgcgggc
gatgtgatacctcaaattgtgagtgttgttgagtctgaacgcccagccgatagccgagaa
attgttttcccaactcactgcccagtctgtggctctgatgtggaacgtgtcgaaggtgag
gccgttgcgcgttgtactggtgggttgatttgtggtgcacaacgtaaagaagcactgaaa
cattttgtctcacgccgtgcgatggatgtggatggcatgggcgataagatcatcgaccaa
ttagttgaaaaagaatatgtgaaaaatccggctgatctgtaccaattaagtgcagggata
ttgacgggtttagatcgcatggggccaaagtcggcacaaaatttagtggaagccctaaat
aaatcgaaatcaacgactctcgctcgttttatttatgcgttaggcattcgtgaggtcggt
gaggctaccgcggcaaatttagcggcgcattatggcacccttgaagccctaatggcggca
gatgaggagtcactcaaaacggtacaagatgttggtcatgtggtggctaagcatgtcgtt
aactttttccgcgaggagcataatcaaactgtcattcaagcgttaatagataaggcgaat
attcattggccagaagctgttgcggtagatgtgagtacgatagatagtccatttgcaggg
aaaaccgtggtattgacgggctctttgagccaactgacacgggatgaagcaaaagataaa
ttagtggcactcggcgctaaagtctctggcagtgtctctaagaagacgcatttagtcatt
gcaggtgaggcggcaggttcaaaactggcaaaagcaaatgagctaggtatacctgtcatt
gacgaaaatgagctaattcgcttattagaagcctaa
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