Paenibacillus stellifer: PSTEL_24595
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Entry
PSTEL_24595 CDS
T03335
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
pste
Paenibacillus stellifer
Pathway
pste03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pste00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PSTEL_24595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pste03400
]
PSTEL_24595
DNA repair and recombination proteins [BR:
pste03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSTEL_24595
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PSTEL_24595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
nSTAND1
AAA_16
AAA_29
BCA_ABC_TP_C
RsgA_GTPase
AAA_21
DnaJ_CXXCXGXG
nSTAND3
AAA_25
cobW
Viral_helicase1
ExoX-like_C
IIGP
Motif
Other DBs
NCBI-ProteinID:
AIQ65812
UniProt:
A0A089LY17
LinkDB
All DBs
Position
complement(5142944..5145817)
Genome browser
AA seq
957 aa
AA seq
DB search
MANENIVIKGARAHNLKNIDVTIPRDRFVVLTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMEKPDVDSIDGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLFARIGHP
HCPDHGIEITSQTVEQMVDRILQYPEKTRLQILAPVISGRKGEHKGLFTDISKQGFVRVR
VDGELRDLSEEIELEKNKKHTIEVVVDRIVIKEDIESRLTDSIETALKLSGGKILVDIIG
QEELLFSSSFACPICGFSMEELAPRMFSFNSPFGACPECDGLGAQMIVDPDLLIPDMGKS
IEDGAFLAWTGSTSNYYPQFLKSVCQHFHIPQDVPVSELTPEQMNKLLHGTGTERIRFKY
ENDFGQSKEAMVPFEGIIPNLERRYRETASEGIREFIEGFMSAKPCPTCKGKRLKREILA
VTVGDKNIADVTDLSIGDGQKFFGELSLTEKEAAIANLILKEISSRLGFLVNVGLNYLTL
SRSAGSLSGGEAQRIRLATQIGSSLMGVLYILDEPSIGLHQRDNDRLISTLAHMRDLGNT
LIVVEHDEDTMLACDYIIDIGPGAGIHGGQVIAQGTPQEIMNDPNSLTGEYLSGRKFIPV
PLKRRVTDGRWLEVRGARENNLKNVNVKIPLGVFTAVTGVSGSGKSSLVNEILYKSLARE
LNRAVKVRPGLHKEIRGLDHLDKVIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAKTNEA
KVRGFQKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCKGKRYNRETLEVKYK
GKSIADVLEMTVEDGTEFFQNIPKIHRKLQTLLDVGLGYIKLGQPGTTLSGGEAQRVKLA
SELYRRSTGKTLYILDEPTTGLHVDDIGRLLEVLHRLVESGESVLVIEHNLDVIKTADYL
IDMGPEGGSGGGTVIATGTPEQIIEVPDSYTGKYLKPVLLRDTERTEALDLQTAEAK
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
ttggcgaacgagaatattgtaatcaagggcgcgagagcccataatctcaagaacatcgac
gttacgataccccgcgaccgctttgtcgtgctgacggggctgagcggttccggcaaatcg
tcgctggcgttcgacacgatttacgcagaaggccagcggcggtatgtggagtcgctctcg
gcttatgcccgccagttcctgggccagatggagaagcctgatgtcgattcgatcgacggt
ctgtctccggccatttccatcgaccagaagacgacgagccgcaacccccggtctaccgtc
ggtacggtgaccgagatttatgactatttgcggctgctgttcgcccggattggtcatccg
cactgcccggaccacggcattgagattacgtcacagaccgtggagcaaatggtggaccgg
atcttgcagtatcccgaaaagacgcggctgcagatcctggcaccggttatatccggacgc
aaaggcgagcacaagggcttgttcaccgatatctcgaagcagggttttgtccgtgtccgt
gtggacggcgagctgcgtgacctgtccgaggagattgagctggagaagaacaagaagcac
acgatagaagtcgtggtcgaccggattgtcatcaaagaggatatcgagtcccgattgacg
gactccatcgagacggcgctgaagctgtccggaggcaaaatactggtcgatattattgga
caggaagagctgctgttcagctccagcttcgcctgcccaatctgcgggttcagcatggaa
gagctggcgccccgcatgttctcgttcaacagcccgttcggcgcgtgcccggaatgcgac
ggactcggcgcccagatgatcgtcgatcccgacctgctgattccggatatgggcaagtcg
atcgaggacggggctttcctggcctggaccggaagcacctccaactattatccgcaattt
ctcaagtcggtgtgccagcactttcatattccgcaggatgtgccggttagcgagctgacc
cccgagcagatgaacaagctgcttcacggtacaggcaccgaacgcattcgtttcaagtat
gagaatgacttcggccagagcaaggaggccatggttccctttgagggcatcattcccaat
ctggaacggcgataccgcgagacggcgtcggagggcattcgggaatttatcgaaggcttt
atgagcgccaagccttgcccgacctgcaagggcaaacgtctgaagcgggaaatcctggcg
gtaacagttggcgacaagaacattgctgatgtaacggatttgtcgatcggcgacggccag
aagttctttggcgagctaagtctgaccgagaaagaagcagccattgccaatctgattctc
aaagaaatcagcagccgtctcggcttcctcgtcaatgtcggtctcaattacttgactctc
agccgttcggccggatcgctgtcgggcggcgaggcgcagcgcatcaggcttgctacgcag
attggctcgagcctgatgggcgtactctatatcctggacgagcccagcattggcctgcat
cagcgtgacaacgaccggctgatttcaacgctggcgcatatgcgagacctcggcaacact
ctgatcgtcgtcgagcatgacgaggatacgatgctggcctgtgattatatcatcgatatc
ggtccgggagcgggcattcacggcggccaggtgattgctcaagggacaccgcaggagatc
atgaacgatccgaactctttgaccggcgaatatcttagcggacgcaagtttatcccggtc
cctctcaaacgtcgcgttacggacggacgctggctggaagtccggggagccagggagaac
aacctgaagaacgtcaatgtcaaaattccgcttggtgtcttcacggcggtaaccggcgtt
tcgggctccggcaaatcgtcgctcgtcaacgagattctgtacaagagcctggcgagagaa
ctgaacagggccgttaaggtgcgtcccggacttcacaaggaaatccgtggtctggaccat
ctggacaaggtcatcgatatcgaccagtctccgatcggccggaccccgcgctccaacccg
gctacctataccggcgtattcgatgatatccgcgatctgttcgccaagacaaacgaagcg
aaggtccggggcttccagaagggccgcttcagctttaacgtcaaaggcgggcgctgcgaa
gcatgccggggtgacggtatcatcaagatcgaaatgcacttcctgcccgacgtctacgtg
ccttgcgaggtctgcaaaggcaaacgctacaaccgggagacgctggaagtgaaatataaa
ggcaagagcattgcagacgtcctagaaatgacggtggaagacggaacggagttcttccag
aacatcccgaagattcaccgcaagctgcaaaccttgctggatgtaggcctaggatatatc
aagctaggtcagccgggaacgacgctttccggcggggaggcccagcgcgtcaagcttgct
tcggagctgtaccgcagaagcacaggcaagacgctgtacattctggacgagccgacgacc
ggcctgcatgtagatgacatcggccgcctgcttgaagtgctgcatcggctggtggaatcc
ggcgaatccgttctggtcatcgagcataacctcgatgtgatcaagacggcggattatctt
attgacatggggccggaaggcggaagtggcggcggaacggtgattgcgaccggtacaccg
gagcagattatcgaggttccggactcgtataccggaaaatatttgaagccggtgctgctg
cgggatacggagcggacggaagccttggatcttcagacagccgaggcgaaataa
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