Phreatobacter stygius: E8M01_06025
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Entry
E8M01_06025 CDS
T05955
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pstg
Phreatobacter stygius
Brite
KEGG Orthology (KO) [BR:
pstg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pstg03032
]
E8M01_06025 (gyrB)
03400 DNA repair and recombination proteins [BR:
pstg03400
]
E8M01_06025 (gyrB)
Enzymes [BR:
pstg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
E8M01_06025 (gyrB)
DNA replication proteins [BR:
pstg03032
]
Prokaryotic type
DNA Topoisomerases
E8M01_06025 (gyrB)
DNA repair and recombination proteins [BR:
pstg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
E8M01_06025 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_insert
GyrB_hook
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QCI63840
UniProt:
A0A4D7B1D3
LinkDB
All DBs
Position
complement(1308371..1310797)
Genome browser
AA seq
808 aa
AA seq
DB search
MAETARIDIPDAEYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDEA
LAGHATAVTVTLNADGSVTVTDNGRGIPTDIHTGEGVSAAEVIMTQLHAGGKFDQNSYKV
SGGLHGVGVSVVNALSSWLRLSIWRGGKHYSMEFRHGDPVAPLAVMGEANGKRGTEVTFL
ASTETFTMVEYDLATLEHRLRELAFLNSGVRIILTDLRHAEEKRIELFYEGGIEAFVRYL
DRNKAGLFEQPIMIKAERDGITVEVGLWWNDSFHENVLCFTNNIPQRDGGTHLAGFRGAL
TRQVTGYAGASGVTKKEKVDLTGDDCREGLTAIVSVKVPDPKFSSQTKDKLVSSEVRPVV
ESVINEALGSWFEEHPTEAKQIAHKVADAAAAREAARKARELTRRKTTLDVASLPGKLAD
CQERDPAKSELFIVEGDSAGGSAKQGRDRAFQAVLPLRGKILNVERARFAKMLSSEMIGT
LITALGTGIGSDEFNADKLRYHKIILMTDADVDGSHIRTLLLTFFFRQMREIIDRGHVYI
AQPPLYKVARGKSETYIKNERALDDYLVTGGLDDAVLVMGTGEIRAGADLGAIVDEARQV
KNLIGSIHSRYNRAVVEQAAIAGALDIEAIKEPTRAEAIAAKTALRLDAIAEEMERGWEG
RFDGQAYVFSRTVRGVKEVAVLDAALLSSAEARRIDEHTKSLSEVYDQPAVFRRKSGELP
ISGPIALFEAIKEAGASGVKLQRYKGLGEMNASQLWETTLDRNARSLLQVKVKEVDEADD
IFVKLMGDVVEPRREFIQENALNATVDA
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaccgcccgcatcgacatcccggacgccgaatatggcgccgacagcatcaag
gtcctcaagggcctggacgccgtgcgcaagcgccccggcatgtatatcggcgataccgat
gacgggtccggcctgcaccacatggtctatgaggtggtcgacaatgccatcgacgaggcg
ctggctggccatgcgacggccgtgacggtgaccttgaatgccgatggctcggtgacggtg
accgacaacgggcgcggcattccgaccgacatccataccggcgaaggtgtctcggcggcc
gaggtcatcatgacccagctgcatgccggcggaaagttcgaccagaattcctacaaggtc
tccggcggcctgcatggcgtcggcgtctccgtcgtcaatgcgctgtcgtcctggctgaga
ctgtcgatctggcgcggcggcaagcattattcgatggaattccgccatggcgatccggtc
gcgcccctcgcggtgatgggcgaggccaacggcaagcgcggcaccgaggtgaccttcctc
gcctcgaccgagaccttcaccatggtggagtatgacctcgccacgctggagcaccggctg
cgcgaactcgccttcctcaattccggcgtccggatcatcctgaccgacctgcgccatgcc
gaggaaaagcggatcgaactgttctatgagggcggcatcgaggccttcgtgcgctatctc
gaccgcaacaaggccgggctcttcgagcaaccgatcatgatcaaggccgagcgcgacggc
atcaccgtcgaggtcgggctgtggtggaacgacagcttccacgagaacgtcctctgcttc
accaacaacattccgcagcgggatggcggcacccatctggccggcttccgcggcgcgctg
acgcgccaggtgaccggttatgccggcgcttccggcgtcaccaagaaggaaaaggtcgac
ctgaccggcgatgactgccgcgagggcctgaccgccatcgtctcggtcaaggtgcccgat
ccgaaattctcgtcgcagaccaaggacaagctggtttcgtccgaggtgcgtccggtggtc
gagagcgtcatcaacgaggcgctgggcagctggttcgaggagcacccgaccgaggccaag
cagatcgcccacaaggtggcggacgcggcggcggcgcgcgaagccgcgcgcaaggcgcgc
gagctgacccggcgcaagaccacgctggacgtcgcctcgctgcccggcaagctcgccgat
tgccaggaacgtgacccggcgaagtccgaactgttcatcgtcgagggtgactcggccggc
ggctcggccaagcagggccgcgatcgcgccttccaggcggtgttgccgctgcgcggcaag
atcctgaatgtcgagcgtgcgcgcttcgccaagatgctgtcgtcggaaatgatcggcacg
ctgatcaccgcgctcggcaccggcatcggcagcgacgagttcaacgccgacaagctgcgc
taccacaagatcattctgatgaccgatgccgacgtcgacggctcgcatatccgcaccctg
ctcctgaccttcttcttccggcagatgcgcgagatcatcgaccggggtcatgtctacatt
gcccagccgccgctctataaggtcgctcgcggcaagagcgagacctatatcaagaacgag
cgcgcgctcgacgactacctggtgaccggcgggctcgacgacgccgtcctggtgatgggc
acgggcgaaatccgggccggcgccgatcttggcgcgatcgtcgacgaggcccgccaggtc
aagaacctgatcggcagcatccactcgcgttacaaccgcgccgtcgtcgaacaggcggcg
attgccggcgcgctcgatatcgaagcgatcaaggagccgacgcgggccgaggcgatcgcg
gccaagaccgcgctcaggctcgacgccatcgcggaggaaatggagcgcggctgggaaggc
cgtttcgacggccaggcctatgtgttctcacgcacggtgcgcggcgtgaaagaggtcgcg
gtgctggatgcggcgctgctgtcctcggcggaagcacgccgcatcgacgaacacaccaag
agcctcagcgaggtctatgaccagccggcggtgttccgccgcaagagcggcgagctgccg
atctccgggccgatcgccctgttcgaggcgatcaaggaggccggcgccagcggcgtcaag
ctgcagcgctacaaaggcctgggcgagatgaacgccagccagctctgggaaaccacgctc
gatcgcaatgcccgctcgctgctgcaggtcaaggtgaaggaggtcgacgaggccgacgac
atcttcgtcaagctgatgggcgacgtcgtcgaaccgcggcgcgagttcatccaggaaaat
gcgctcaacgcgacggtcgacgcttga
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