Plautia stali symbiont: E05_46510
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Entry
E05_46510 CDS
T03051
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
psts
Plautia stali symbiont
Pathway
psts03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psts00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E05_46510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psts03400
]
E05_46510
Enzymes [BR:
psts01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
E05_46510
DNA repair and recombination proteins [BR:
psts03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E05_46510
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_25
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BAN99417
UniProt:
U3U7D8
LinkDB
All DBs
Position
complement(3662785..3666324)
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AA seq
1179 aa
AA seq
DB search
MSQRPESLNPLTLPLQGERLIEASAGTGKTFTIGLLYLRLLLGLGGPNAYARPLSVEEIL
VVTFTEAATAELRGRIRENIHELRLACLRGVSANPMLMQLLADIAQPAEAAALLLAAERQ
MDEAAIFTIHGFCQRMLNLNAFESGMLFEQQLIEDEQQLLRQATADFWRRHCYPLTLDIA
RVIVAEWSGPEQLLSTLRPWLQGESPSLRLAPRDSETLTSRHSSNLARIAEMKAQWRALG
EEVLTLVGQSDVDKRSYSSKNLPLWVSKVSAWAQSETADYQIPAELARFGQQVLNEKTKK
GAPPQHPLFAAIDTFLAQPLSLRDLVIARALVEVRHAVRKEKRLQALLGFDDLLSRLDEA
LQQPGGEQLAQAIRQRFPVALIDEFQDTDPLQYRIFRTLYLQQLQHALLLIGDPKQAIYA
FRGADIFTYIRARSEVHAHYTLDTNWRSSPAMVESVNQLFMRQPAPFLFADIPFLPVNAA
PPNQRLSLSIDGEEQAALRFWLQPGAGCSVSEYQQLMAQQCAADISRWLQAGQQQRALLG
KTPDQRPVQASDITVLVRSRNEANLIRAALNQLGIPSVYLSNRDSVYTTPEARELLWLLQ
AILAPEQERMLRTALATSLFAFDAAQLDALDQDARGWDALVDTFARWQQLWHQRGVLPML
RQLMLERQLAENLLASENGERRLTDLLHLGELLQEAAAQLDSPHALVRYLAQQIARPDSQ
SASQQLRLESDRHLVQIVTIYKSKGLQYPLVWLPFVAGFREADIALYHDREHYNAVLDLQ
NDEQSLALAEQERLAEDLRLLYVALTRSVYHCSVGVAPLFRGTRKKEGDSDLHKSALGFL
LQRGEPATAEQLASLLHDISVTGTEVVLAQPQGHERWQALDQVDDELDARSVTRALADPW
RVTSYSGLQQHGSHRLLDVMPGFDAEAVGEDRQAEVLEAVLTPHHFPHGAAPGTFLHTLF
ESLDFTQPPSAVQLEQQLQQSGYPLHWQPMLSKWITRVVNTPLNTEGIRLSDITPGNRLI
EMEFYLPIDGLLTAPALDALMRQDPLSRQAPPLDFRQVQGMLKGFIDLVFRWQGKYYLLD
YKSNWLGESHQAYTPQAMAQAMIDHRYDLQYQLYTLALHRYLQHRLTHYDYEQHFGGVFY
LFLRGMDGSSPDNGVFHTRPTSDFVSQLDSLFRGPGAAA
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcgccctgaatcgctcaatcccctgacgctgccgctgcagggtgagcgtctg
attgaggcctccgccggcaccggtaagacctttaccatcggtctgctctacctgcgtttg
ctgctgggacttggcggaccgaatgcctatgcgcgcccgctgtcggtggaagagattctg
gtggtgacctttaccgaagccgccaccgccgaactgcgcggccgtatccgggaaaatatt
catgagctgcggctggcctgtctgcgcggcgtcagcgcaaacccgatgctgatgcagctg
ctggccgacattgcccagcccgctgaggcggctgcgctgctgctggcagctgaacgtcag
atggatgaggcggcgatcttcaccattcacggcttctgccagcgcatgctcaatctcaat
gcgtttgagtccggtatgctgttcgagcagcagctgattgaagatgaacagcagctgttg
cgtcaggcgacggcggatttctggcggcgccactgctatccgctgacgctggatattgcg
cgcgtcatcgttgcggaatggagcggaccggagcagctgttgtcgacgctgcgtccgtgg
ctgcagggcgagtcgcccagcctgcgcttggcgccgcgcgacagtgaaaccctgacatcg
cgccacagcagcaacctggcgcgtattgccgaaatgaaagcgcagtggcgggcgctgggc
gaagaggtgctgacgctggtcgggcagtctgatgtcgataagcgcagctacagcagcaaa
aacctgccgctgtgggtcagcaaagtcagcgcttgggcgcagagcgagaccgcggattac
cagattcccgccgagctggcgcgtttcggtcagcaggtgctcaatgaaaaaactaaaaag
ggtgcgccaccgcagcacccgttgtttgccgccattgatacgttcctggcgcagccgctg
tcgctgcgcgatttggtgatagcgcgcgcgctggtggaggtgcgtcacgcggtgcgtaaa
gagaaacgcctgcaggcgctgctggggtttgacgatctgctgagccggctggacgaggcg
ctgcaacagcctggcggcgagcagctggcgcaggcgattcgccagcgctttccggtggcg
ctgattgacgaattccaggatactgacccgctgcagtaccgtattttccgcacgctctat
ttacagcagctgcagcatgcgctgctgctgattggcgacccgaaacaggccatctacgcc
ttccgcggtgcggacatctttacctatatccgcgcgcgcagtgaagttcacgcccactac
acgctggataccaactggcgctcgtcaccggcgatggtggagagcgtcaatcagctgttt
atgcgccagcccgcaccgtttctgtttgcggacatcccgtttctgccggtcaatgccgcg
ccgcccaatcagcgtttgtcgctgagtatcgacggcgaggagcaggccgcgctgcgcttc
tggctacagccgggcgcaggctgcagcgtcagtgaataccagcagctgatggcgcagcag
tgtgccgccgatatcagccgctggctgcaggcgggtcagcaacagcgcgcgctgctgggc
aaaacgcccgaccagcggccggtgcaggcctcggacatcaccgtactggtgcgcagtcgg
aacgaagccaatctgattcgcgccgcgctcaatcagctcggcatcccttcggtgtatctc
tccaaccgcgacagcgtgtataccacgcccgaggcgcgagaactgctgtggcttttgcag
gcgatcctcgcgcccgagcaggagcgtatgctgcgcaccgcgctggccacgtcgctgttt
gcctttgatgccgcgcagctggatgcgctggatcaggatgcacgcggctgggatgcgctg
gtggatacctttgcccgctggcagcaattgtggcaccagcgaggcgtgctgccgatgctg
cgtcagctgatgctggagcgccagctggcagaaaacctgctggcctcagagaacggcgag
cgtcgcctgaccgatctgctgcacctcggcgaactgctgcaggaggcggcggcccagctc
gacagtccgcacgcgctggtgcgttatctggcgcagcaaatcgcccgaccggacagccag
tcggccagccagcagctgcggctggagagcgaccgccacctggtgcagattgtcaccatc
tataaatccaaggggttacagtatccgctggtgtggctgccgtttgtcgccggtttccgc
gaggcggatatcgcgctctatcacgaccgcgagcattacaacgcggtactggatttgcag
aatgatgagcaaagtctggcgctggcggagcaggagcggctggcagaggatttgcgcctg
ctgtacgtggcgctgacgcgttcggtgtatcactgcagcgtcggtgttgcaccgctgttt
cgcggcacgcgcaagaaagagggcgacagcgatctccataaaagcgcgctgggtttcctg
ctgcagcgcggcgagccggccaccgcagaacagctggcgagtttactgcacgacatcagc
gtgacaggaaccgaagtggtgctggcgcagccgcagggccatgaacgctggcaggcgctg
gaccaggttgacgatgagctggatgcgcgcagcgtcacacgcgcgctggccgatccgtgg
cgtgttaccagctactccgggctgcagcagcacggcagccaccgtctgctggatgtgatg
ccgggcttcgatgcggaagcggtcggggaagatcgccaggcggaagtgctggaagccgtg
ctgacgccgcaccatttcccgcacggcgcggcgcccgggacttttctgcatacgctgttt
gaatcgctcgactttacccagccgccgtcagcggtgcagctggaacagcagttgcagcag
agcggctatccgctgcactggcagccgatgctgagcaagtggattacccgcgtggtgaac
acgccgctcaacactgaagggatccggctgagcgacatcacaccgggcaatcgcctgatc
gagatggagttctatctgccgattgacggactgctgacggcaccggcgctggacgcgtta
atgcggcaggatccgctgtcgcgtcaggcgccgccgctcgacttccgccaagtgcagggc
atgctgaagggcttcatcgacctggtatttcgctggcagggcaaatactatctgctggat
tacaaatctaactggctgggcgagagccatcaggcgtacacaccgcaggcgatggcgcag
gcgatgatcgaccaccgttacgatttgcagtatcagctgtatacgctggcgctgcatcgc
tatttgcagcaccgcctgacgcattacgattatgaacagcattttggcggcgtattctat
ctgtttttacgcggcatggatggcagctcgccggataacggggtgttccatacccgaccg
acgtcagatttcgtttcacaactggatagcctgtttcgcgggccgggagcagcagcatga
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