Stutzerimonas stutzeri 28a24: CH92_00930
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Entry
CH92_00930 CDS
T03390
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pstt
Stutzerimonas stutzeri 28a24
Pathway
pstt03420
Nucleotide excision repair
pstt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pstt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CH92_00930 (uvrD)
03430 Mismatch repair
CH92_00930 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pstt03400
]
CH92_00930 (uvrD)
Enzymes [BR:
pstt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CH92_00930 (uvrD)
DNA repair and recombination proteins [BR:
pstt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CH92_00930 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
CH92_00930 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
AAA_22
DUF4391
Motif
Other DBs
NCBI-ProteinID:
AHL73734
UniProt:
W8QTX3
LinkDB
All DBs
Position
complement(199335..201527)
Genome browser
AA seq
730 aa
AA seq
DB search
MHDDLSLLLNSLNDAQRQAVAAPLGRQLVLAGAGSGKTRVLVHRIAWLHQVERASLHSIL
SVTFTNKAAAEMRQRIEQLMKVNPQGMWVGTFHGLAHRLLRAHWQEAKLAQNFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWWINGQKDEGLRPKHIQPSGDLFLATMLSIYQAYE
EACARAGVIDFSELLLRALDLWRDNPGLLDHYQRRFRHILVDEFQDTNAVQYAWLRLLAK
GGDSLMVVGDDDQSIYGWRGARVENLHQFSEDFQDAETIRLEQNYRSTACILKAANALIA
NNQGRLGKELWTEGCEGEPISLYAAFNEHDEARYVVESIESAIRKEGLARSEIAILYRSN
AQSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLIQTRDNDAALERVINVPARG
IGEKTVEALRQLARQEGTSMWAALHQAVGTKVVSGRAASALNGFVELIDTLALKVEGMQL
HNMAQLVIEQSGLLAYHRDEKGEKAQARVENLEELVSAARAFDHYSEEEEDEQTPLAAFL
DHASLEAGEQQAGDHEDSVQLMTLHSAKGLEFPLVFLVGMEEGLFPHKMSLEEPGRLEEE
RRLAYVGITRAMQQLIITYAETRRLYGSETYNKVSRFVRELPPALVSEVRLSNTVSRSFN
TRGMSGGSLFDGANVPETPFNLGQRVRHSLFGEGTILNFEGSGAQARVQVNFESEGSKWL
MLSYAKLEAL
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgcatgatgatctctcccttctcctgaactctctcaacgatgcccagcgccaggccgtg
gccgcgccgctgggtcgtcaattggtcctcgccggtgctggctccggcaagacccgtgtg
ctggtgcaccgcatcgcctggctacaccaggtcgagcgcgcatctttgcactcgattctt
tcagtaacctttaccaacaaggctgccgccgagatgcgtcagcgcatcgagcagctgatg
aaggtcaacccgcaaggcatgtgggtcggcaccttccacggcttggcgcatcgcctgcta
cgggcacactggcaggaagccaagctggcgcagaatttccagatcctcgattccgacgat
cagcagcggctggtcaagcgtgtgatccgcgagctcggcctcgatgagcaacgttggccg
gcgcgtcaggcccagtggtggatcaacggacagaaggacgaaggcctgcggcccaagcac
attcagcctagcggcgatctgttcctggccaccatgctgagcatctaccaggcctacgaa
gaagcctgcgcgcgcgccggggtgatcgacttctccgagctgctgctgcgagcgctggac
ctttggcgcgacaacccgggcctgctcgatcattaccagcgccgcttccgccacatcctg
gtggacgaattccaggacaccaacgccgtgcaatacgcctggttgcgcctgttggccaaa
gggggcgacagcctgatggtggtcggcgacgacgatcagtcgatctacggctggcgtggt
gcgcgggtagaaaacctgcaccagttcagcgaagacttccaggacgccgaaaccatccgc
ctggaacagaactaccgctccactgcctgcatcctcaaggccgccaacgcgctgatcgcc
aacaaccagggacgcctcggcaaggaattgtggaccgaaggctgcgaaggcgagccgatc
agcctgtatgccgctttcaacgaacacgacgaagcccgctacgtggtcgaaagcatcgag
agcgccattaggaaggaaggcctggcacgtagcgaaatcgccatcctctaccgctccaac
gcccagtcccgtgtgcttgaagaagccctgctgcgtgaacgcatcccctaccgcatctat
ggcggccagcgcttcttcgaacgtgccgagatcaagaacgccatggcctacctgcgcctg
atccagacgcgcgacaacgacgccgcgctggagcgggtgatcaacgtgccggcgcgcggc
atcggcgagaagaccgtcgaagccctgcgccagttggcccgccaggagggcacctcgatg
tgggccgcgctgcaccaagcggtcggtaccaaggtggtttcaggccgtgcagccagtgcg
ctgaacggtttcgtcgagctgatcgacacgcttgctttgaaagtcgaaggcatgcagctg
cacaacatggcgcagctggtcatcgagcagtccggactgctcgcttatcaccgcgacgaa
aagggcgaaaaagcccaggctcgggtggaaaacctcgaggaattggtctccgccgcccgc
gccttcgaccattacagcgaggaggaagaagacgagcagacaccacttgccgccttcctc
gaccatgcctcgctggaagccggcgagcagcaggccggcgatcacgaggacagcgtgcaa
ttgatgacgctgcacagcgccaagggcctggagtttccgctggtgtttctggtgggcatg
gaggaagggctgttcccgcacaagatgagcctggaagaacctggccgtctcgaagaagaa
cgccgcctggcctacgtcggcattacccgcgccatgcagcaactgatcatcacctacgcc
gaaacccggcggttgtatggcagcgagacctataacaaggtctcgcgcttcgtgcgcgaa
ctgccgccagcactggtcagcgaagtgcgcctgagcaataccgtcagccgcagcttcaac
acccgtggcatgagcgggggctcgctgttcgatggcgccaacgtgccggaaacgccgttc
aacctcggtcagcgtgtccgccattcgctgttcggcgaaggcaccatcctcaatttcgag
gggtccggcgctcaggcacgtgtccaggtgaacttcgagagcgaaggaagcaagtggttg
atgctcagttatgccaaactcgaagcgctatga
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