Stutzerimonas decontaminans: UIB01_00020
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Entry
UIB01_00020 CDS
T03366
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pstu
Stutzerimonas decontaminans
Brite
KEGG Orthology (KO) [BR:
pstu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pstu03032
]
UIB01_00020 (gyrB)
03400 DNA repair and recombination proteins [BR:
pstu03400
]
UIB01_00020 (gyrB)
Enzymes [BR:
pstu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
UIB01_00020 (gyrB)
DNA replication proteins [BR:
pstu03032
]
Prokaryotic type
DNA Topoisomerases
UIB01_00020 (gyrB)
DNA repair and recombination proteins [BR:
pstu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
UIB01_00020 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AHY40916
UniProt:
A0A023WLQ0
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All DBs
Position
3813..6227
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AA seq
804 aa
AA seq
DB search
MSENHTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGHCSD
ISITIHTDESITVRDNGRGIPVDIHEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVG
VSVVNALSEELMLTIRREGKVWEQLYRHGVPQAPLAPVGETDSSGTQIHFKPSAETFQNI
HFSWDILAKRLRELSFLNSGVGIVLRDERTAKEELFKYEGGLSAFVAYLNTNKTPVNEVF
HFNVQRDDGVGVEVALQWNDSFNENILCFTNNIPQRDGGTHLAGFRSALTRNLNSYIEQE
GLAKKHKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKHFADF
LLEHPSEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSEL
YIVEGDSAGGSAKQGRNRKTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIGR
DEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELIERGYVYIAQPPLYKVKRG
KQEQYIKDDEAMEEYLTQSALEDASLHVNEGAPGLSGGALEKLVNDYRTVMKTLQRLSRL
YPQELTEHFIYLPRVPVEQLADHSAMQAWLEQYSALLKVGERSGLIYNVSLREDKERHLW
LPEVEISSHGLASYITFNRDFFGSNDYRTVTALGEKLNSLLEEGAYVQRGERKKQVSTFK
QALEWLMAEGTRRHSVQRYKGLGEMNPDQLWETTMDPNVRRMLKVTIEDAIGADQIFNTL
MGDAVEPRRDFIETNALAVSNLDF
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaaccacacgtacgattcgtcgagcatcaaggtactcaaaggcctcgatgca
gtgcgcaagcgccctggcatgtacatcggcgataccgacgacggcaccggcctgcaccac
atggtcttcgaggtcgtggataactcgatcgacgaagcgctggccggccattgcagtgac
atctccatcaccatccataccgatgagtccatcaccgttcgtgacaacggtcgcggtatc
ccggtggatatccacgaggaaggtgtttcggcggccgaggtcatcatgaccgtgctgcac
gctggtggtaagttcgatgacaactcctacaaggtatccggcggactgcacggcgtaggt
gtttcggtggtcaacgcgctgtcagaggagttgatgctgactatccgccgcgagggaaaa
gtgtgggagcagctctaccgtcatggtgtgccccaggcgccgctcgccccggtcggtgaa
accgattcctcgggcacgcaaatccatttcaaaccgtcagcagagacgttccagaacatc
catttcagctgggacattctggccaagcgtctgcgcgagctttcctttctgaactctggc
gtcggtatcgttctgcgtgacgaacgtactgccaaggaagagttattcaaatacgagggc
ggtctgagcgccttcgttgcctacctgaacaccaacaaaacgccggtcaacgaggtgttc
cacttcaacgttcagcgcgacgacggcgttggtgtcgaggtggcgctgcagtggaacgac
agcttcaacgagaacattctctgctttaccaacaatatcccgcagcgcgacggcggcacc
catttggccggtttccgctccgcgctgacgcgaaacctgaacagctacatcgagcaggaa
ggcctggccaagaagcacaagatcgccactaccggcgacgatgcccgcgaaggtctgacc
gcgatcatttccgtgaaggttccggatcctaagttcagctcgcaaaccaaggacaaacta
gtttcctcggaggtgaaaaccgccgtggaacaggagatgggcaagcacttcgccgacttc
ctgcttgagcatccaagcgaagcaaaggcagtggttggcaagatgatcgacgctgcccgt
gctcgcgaagctgcgcgcaaggcacgggaaatgacccggcgcaagggcgctctggatatc
gccggcctgccgggcaagctcgcagattgccaggaaaaggatcctgcgctgtccgaactc
tacatagtggagggtgattctgcgggtggctcggccaagcagggccgtaaccgcaagacc
caggcaatcttgccgctcaagggcaagatcctcaacgtcgagaaagcacgcttcgacaag
atgatttcttcccaggaagtgggcacgctgattaccgctctgggctgtggtatcggccgc
gatgaatacaacatcgataaactgcgctaccacaacatcatcatcatgaccgacgccgat
gtcgacggttcgcacatccggactctgctgctgacgttcttcttccgtcagctgcctgag
ctgatcgagcgcggttacgtgtatatcgctcagccgccgctgtacaaggtcaaacgcggc
aagcaggagcagtacatcaaggacgatgaggcgatggaggaatacctcactcagtccgct
ctggaagacgccagcctgcacgttaacgaaggcgccccggggctttctggcggagcgctg
gagaagctggtcaacgattaccgcacggtgatgaagacgttgcagcggctgtcacgtctg
taccctcaggaactgacggaacacttcatctacctgccgcgtgtgcctgtagagcaactg
gccgatcactcggcgatgcaggcatggctcgagcaatacagcgcgctgctcaaggttggc
gaacgctccggtttgatctacaacgtcagcctgcgcgaggacaaggaacgccatctgtgg
ctgccggaagtggagatcagttcgcacggcctggctagctacatcacctttaaccgtgac
ttcttcggcagcaacgactaccgaaccgttacggcgcttggcgagaagttgaacagcctg
ctcgaagaaggcgcctacgttcagcggggcgagcgcaagaaacaggtgtccaccttcaag
caagcacttgaatggttgatggccgaaggcacccgccgccatagcgttcagcgatacaag
ggactgggcgaaatgaacccggatcagctgtgggaaaccacgatggacccgaacgtgcgg
cgcatgctcaaggtaactatcgaggatgcgattggtgcggatcagatcttcaataccctg
atgggcgatgctgtcgagccgcgtcgagatttcatcgaaaccaacgctctggctgtgtcg
aacttggacttctga
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