Pantoea stewartii subsp. stewartii: DSJ_06550
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Entry
DSJ_06550 CDS
T04970
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
pstw
Pantoea stewartii subsp. stewartii
Pathway
pstw00550
Peptidoglycan biosynthesis
pstw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pstw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DSJ_06550
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pstw01003
]
DSJ_06550
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pstw01011
]
DSJ_06550
Enzymes [BR:
pstw01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
DSJ_06550
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
DSJ_06550
Glycosyltransferases [BR:
pstw01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
DSJ_06550
Peptidoglycan biosynthesis and degradation proteins [BR:
pstw01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
DSJ_06550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
PBP1_TM
Transpeptidase
UvrB_inter
TFIIA
FtsA_C
Motif
Other DBs
NCBI-ProteinID:
ARF49032
UniProt:
H3R8Q1
LinkDB
All DBs
Position
1357780..1360317
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AA seq
845 aa
AA seq
DB search
MSGNDREPIGRKGKPLPPRNSARRGRRRDIDSDVAQDDFDDDYEEEAPVPRKGKGKGGKP
PRGKRRWLGWFIKLFLVFVVVMAAWGVYLDSEIRSRIDGKVWQLPAAVYGRMVSLEPGMA
YNKSEMIALLEGTQYREVSRITRPGEFSVKGNTIELLRRPFDFPDSKEGQIHARMTFSKD
ELSEIKNVETGRDFGFFRLDPRLITMLQSPNGEQRLFVPRAGFPDLLVDTLIATEDRHFY
EHDGISPYSIGRAFLANITAGKAVQGGSTLTQQLVKNLFLTNERSLWRKAREAYMAVIMD
ARYSKDRILELYLNEVYLGQAGNDQIRGFPLASLYYFGRPVDELSLDQQAMLVGMVKGAS
LYNPWRNPKLALERRNLVLRLLQQQKVIDQELYDMLSARPLGVQPKGGVITPQPAFMQMV
RNELQAKLGDKVKDLSGVKIFTTLDPVSQDAAEKAVVDGIPTLKKQRGLKDLETAMVVVD
RFTGEVRAMVGGADPQFAGYNRALQARRSIGSLAKPATYLTALSQPNTYRLNSWIADEPI
ALKQPNGSIWKPMNDDRRFSGKVMLVDALTNSMNVPTVNLGMTLGLNAVVDTWTKLGVPK
DQLNPVPAMLLGALNLTPVEVAQAFQSIASGGNHAELSAVRSVIAEDGTVLYQSFPQAQR
VEPAQAAYLTLYTMQQVVDRGTARALGARFPNAHLAGKTGTTNDLVDSWFAGIDGKEVAI
TWVGRDNNQPTKLYGASGAMQIYRRYLDNQAPMPLQLTPPEDVTMMNIDTAGNFVCGTGS
STWRTLPVWTLDPNALCQQQQQQVQQMQQQQQMQDQQQQQLQQQQQQEQKDSNGVAGWIK
DMFGK
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggaacgatcgcgaacctattgggcgcaaaggaaaaccgttgccaccgcgcaac
agcgcccgccgtgggcggcgcagagacatcgatagtgatgtcgctcaggacgattttgat
gatgattacgaggaggaagcgccggtgccacgtaaaggtaaaggtaaaggtggaaaaccg
ccgcgcggcaaacgccgttggctgggatggtttattaagctgttcctggtatttgtagtg
gtcatggccgcgtggggcgtatacctcgattcggaaattcgcagccgcattgacggtaaa
gtgtggcaactgcccgctgctgtctacggtcgtatggtcagcctcgaacctggcatggcc
tacaataaaagcgaaatgattgccctgctggaaggcacgcagtaccgcgaagtctcgcgc
attacgcgtccgggagaattctcggtcaaaggtaacaccattgaactgctgcgtcgtccg
tttgatttcccggacagcaaagaagggcagattcatgcccgaatgacattcagcaaagat
gagctgagtgagattaagaacgtcgaaaccgggcgtgattttggtttcttccggcttgat
cctcgtctgattacgatgctgcagtcacccaatggtgaacagcgcttgttcgttccccgt
gccggtttccctgatctgttggtggataccttaatcgcaacggaagatcgccacttttat
gagcacgacggcatcagcccgtactccattggccgtgccttcctggcgaacatcaccgcc
ggaaaagcggtgcagggcggcagtacgcttacccagcaactggtcaaaaacctgttcctg
actaatgagcgttcgctgtggcgtaaagcccgtgaagcctatatggccgtgatcatggat
gcccgttacagcaaagatcgtatcctggagctttacctgaacgaggtgtatctcggtcag
gcaggtaacgatcagatccgcggtttccctctggccagcctctactattttggccgcccg
gttgacgagctgagtctcgatcagcaggcgatgctggtgggcatggtgaaaggggcgtcg
ctctataacccatggcgtaacccgaaactggccctggaacgacgtaatctggtgctgcgc
ctgctgcagcagcagaaagtgatcgatcaggaactgtacgacatgctgtcggcccgtccg
ttgggcgtgcagccgaaaggcggtgtgattacgccacagcctgcctttatgcagatggtg
cgtaatgagcttcaggcaaaactgggcgacaaagtcaaagatctgtcgggcgtgaaaatt
ttcaccaccctggatccggtttctcaggatgcggccgaaaaagccgttgtagacggtatt
cccaccctgaaaaaacagcgcggtctgaaagatctggaaaccgcaatggtggtcgttgac
cgctttacaggtgaagttcgtgcgatggtcggtggggccgatccgcagtttgccgggtat
aaccgcgcgttgcaggcgcgccgatccatcggctcgctggcgaaaccggccacctatctg
accgcgctgagccaacccaacacttaccgcctgaacagctggattgcggatgagcctatt
gcgctgaaacagccgaatggcagcatctggaaacccatgaacgacgaccggcgctttagt
ggcaaagtgatgctggtcgatgcgctgacgaactccatgaacgtgccaacggttaacctg
ggcatgacgctgggactgaatgcggtggtggacacctggacgaagctgggtgtgcctaaa
gatcagctgaatccggttccggcgatgttactgggcgcactcaacctgacgcctgtggaa
gtggctcaggccttccagtccattgccagcggcgggaatcatgcagagctgtcagccgtg
cgttcggtcatcgcggaagacggtaccgtgctgtatcagagcttcccgcaggcgcagcgc
gttgaaccggcacaggcggcttatttaacgctgtataccatgcaacaggtcgtcgatcgc
ggtaccgcccgggcgctgggggcacgtttcccgaatgcgcacctggcagggaaaaccggc
accacgaacgatctggtcgacagctggtttgccgggattgatggtaaagaagtggcgatc
acctgggttggccgtgataacaaccagccgaccaaactctatggtgccagcggggcgatg
cagatttaccgccgctacctggacaatcaggctccgatgccgctgcagcttacgccgccg
gaagatgtgacgatgatgaacatcgatactgcgggtaactttgtttgcggtacaggaagc
agcacatggcgcacgctgcctgtctggacactggatccgaatgcgctctgccagcagcag
caacagcaggttcagcaaatgcagcaacagcagcagatgcaggaccagcaacagcagcag
ttacagcagcagcaacagcaggaacaaaaagacagcaacggcgttgccggctggataaaa
gatatgttcggtaaataa
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