Pantoea stewartii subsp. stewartii: DSJ_12495
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Entry
DSJ_12495 CDS
T04970
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
pstw
Pantoea stewartii subsp. stewartii
Pathway
pstw02020
Two-component system
pstw02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pstw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DSJ_12495
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DSJ_12495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pstw03021
]
DSJ_12495
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pstw02035
]
DSJ_12495
Transcription machinery [BR:
pstw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DSJ_12495
Bacterial motility proteins [BR:
pstw02035
]
Flagellar system
Flagellar assembly proteins
Stator
DSJ_12495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
Sacchrp_dh_C
UPF0122
GerE
zf-C4H2
Motif
Other DBs
NCBI-ProteinID:
ARF50080
UniProt:
H3RC29
LinkDB
All DBs
Position
2493621..2494343
Genome browser
AA seq
240 aa
AA seq
DB search
MNDLYTAEGVMDKHSLWQRYVPLVRHEALRLQVRLPASVELDDLLQAGGIGLLNAVERYD
ALQGTAFTTYAVQRIRGAMLDELRSRDWAPRSVRRNAREVAGAMHQVEQMLGRAASEQEV
AQQLNVSIEEYRQILLDTNNSQLFSYDEYREEHGDSAELVTEGHEEANPLHQLMEGSLRE
RVIEAIEALPEREKMVLTLYYQEELNLKEIGAVLDVGESRVSQLHSQAIKRLRARLTGAR
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgatctctataccgccgaaggcgtgatggacaaacattcgctctggcagcgctac
gtcccactggtgcgtcatgaagcactgcgcttgcaggttcgcctgcctgccagtgtggaa
cttgacgatctgctgcaagccgggggcattggtctgttgaatgcggtggagcgctacgac
gcgcttcagggtaccgcctttaccacgtatgcagtccagcgcattcgtggcgcaatgctt
gatgagcttcgcagccgggactgggcgccacgcagcgtcagacgtaatgcacgtgaggta
gccggagccatgcatcaggttgagcagatgctgggtcgggccgcttccgagcaggaagtc
gcgcaacagttgaatgtttcgatagaagagtaccggcagattctgttggataccaacaac
agtcagctcttttcatacgacgagtatcgggaagaacacggtgacagtgcggagctggtg
acggaagggcacgaagaggccaatccacttcatcagttaatggaagggagtctgcgtgaa
cgcgtcatagaagcgatcgaggcgttgcctgagcgcgagaaaatggtgctgacactgtac
taccaggaagaactgaatcttaaagagattggcgcggtacttgatgtcggggaatcccgg
gtcagccaactgcacagtcaggcgattaaacgcttgcgtgcccgacttacgggagcgcgc
tag
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integrated database retrieval system
