Pseudoxanthomonas suwonensis 11-1: Psesu_1065
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Entry
Psesu_1065 CDS
T01403
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
psu
Pseudoxanthomonas suwonensis 11-1
Pathway
psu02020
Two-component system
psu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
psu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Psesu_1065
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Psesu_1065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psu03021
]
Psesu_1065
Transcription machinery [BR:
psu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Psesu_1065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
MarR_2
HTH_23
Sigma70_r4
HTH_Crp_2
HTH_38
HTH_17
HTH_Tnp_ISL3
HTH_29
HTH_28
Sigma70_r4_2
HTH_AsnC-type
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
ADV26915
UniProt:
E6WRW6
LinkDB
All DBs
Position
complement(1206686..1208110)
Genome browser
AA seq
474 aa
AA seq
DB search
MKARLQTSLGQSLVMTPQLRQAIRLLQMSTVELQAEVAEAIETNPLLEWTDEAEFQAPAS
SGSDTVSPETSEAAPPDDGGGEDWAPEEVAWQSPGGQGYDEDGEGAAERMAEVETLADHL
LWQLHLSPLSARDRRIGAMLIDALDEDGYLREPLSSIAESLLPETRASEEEILTVLHQVQ
RFDPAGVGARDLGECLRLQLQVLPECTPGRALALRIVAGPMERLPKIGTQGLVQELRAPV
DEVEQAVQLVRSLDPRPGKQLAEVEHDTYVVPDCVIWRQRGVWKAALSQQAQPRVSIHRG
YEQLIRRCGDGDAGYLRTQLQEARWLLKSLEARGETLLKVVRCLLRQQAAFLEFGGQALR
PLTLREVAAELGLHESTVSRAIARKYVRTPRGTLPLKAFFASGIDTDGGGEASSTAIQAM
IRRLIDDENPRKPLSDAKLADMLKQGGVPVARRTVAKYRELMNIPASHERVRIG
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaaggctgcagacatcgctgggacagagcctggtcatgacgccccagctgcgc
caggccatccgcctgttgcagatgtcgaccgtggagctgcaggccgaagtcgccgaggcg
atcgaaaccaatccgctgctggaatggaccgacgaggccgagttccaggcgcccgcgtct
tctggcagcgacaccgtctctccggaaaccagcgaggccgcaccgcccgacgatggcggc
ggcgaggactgggcgccggaggaagtggcctggcagtcccccgggggccagggctacgac
gaggacggcgaaggcgcggccgagcgcatggccgaggtcgagacgctcgccgaccacctg
ctgtggcaactgcacctctcgccgctgtcggcgcgcgaccgccgcatcggcgcgatgctg
atcgatgcgctggacgaggacggctacctgcgcgagccgctgtcgtcgatcgccgaatcg
ctgctgccggaaacccgcgccagcgaggaggaaatcctcaccgtgctgcaccaggtgcag
cgcttcgaccccgccggcgtcggtgcgcgcgacctcggcgaatgcctgcgcctgcagctg
caagtgctgcccgaatgcaccccgggccgcgccctggccctgcgcatcgtcgccgggccg
atggagcggctgccgaagatcggcacccaggggctggtccaggaactgcgcgcgccggtc
gacgaggtcgagcaggccgtgcagctggtgcgctcgctggatccgcgtccgggcaagcag
ctggccgaggtcgaacacgacacctacgtggtgccggactgcgtgatctggcgccagcgc
ggggtatggaaggcggcgctgtcgcaacaggcgcagcccagggtctcgatccatcgcggt
tacgaacagctgatccgccgctgtggcgacggcgatgccggctacctgcgcacccagctg
caggaagcgcgctggttgctcaagagcctggaggcacgcggcgagaccctactgaaggtg
gtgcgctgcctgctgcgccagcaggcggctttcctggagttcggcgggcaggcgttgcgc
ccgctgaccctgcgcgaggtcgccgccgaactgggcctgcacgaatccaccgtgtcccgc
gccatcgcccgcaagtacgtgcgcaccccgcgcggcaccctgccgctgaaggcgttcttc
gcctcgggcatcgacaccgacggtggcggcgaggcgtccagcaccgcgatccaggccatg
atccgccgcctgatcgacgacgagaacccgcgcaagccgctttctgacgccaagctggcc
gacatgctcaagcagggcggcgtaccggtggcgcggcgcacggtggcgaagtatcgtgag
ctcatgaacattccggcatcgcacgagcgggtccgcatcggctag
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