KEGG   Candidatus Planktophila sulfonica: A1sIA56_04800
Entry
A1sIA56_04800     CDS       T05158                                 
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
psuf  Candidatus Planktophila sulfonica
Brite
KEGG Orthology (KO) [BR:psuf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psuf03019]
    A1sIA56_04800
   03009 Ribosome biogenesis [BR:psuf03009]
    A1sIA56_04800
Messenger RNA biogenesis [BR:psuf03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     A1sIA56_04800
Ribosome biogenesis [BR:psuf03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    A1sIA56_04800
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: ASY16215
UniProt: A0A249KHN4
LinkDB
Position
961458..962027
AA seq 189 aa
MTAVLPHLIWIDCEMTGLDLTTDALVEIAVLVTDSDLNVIGDGVDVVIHATQGELDSMND
FVREMHTSSGLITEIPNGISMSAAEEQILTYLQSAGTEPGKSPLAGNSVSVDRNFIARDM
LKLNEYLHYRTIDVSSIKELARRWYPKTYFAAPAKTGNHRALGDIRDSIAELAYYRQALF
IDSGREQVK
NT seq 570 nt   +upstreamnt  +downstreamnt
atgactgctgtcttgccacacctgatctggatagattgcgaaatgactgggctcgatctc
acgaccgatgccctcgttgaaattgcagtcctcgttaccgactctgatttaaatgtgatt
ggtgatggcgttgatgtcgttattcatgcaacgcaaggtgaactcgattccatgaatgac
tttgttcgcgagatgcatacttcttcgggtctcataactgaaatccctaatggaatttcg
atgtcagcggctgaagaacagatacttacttatctgcaatcagctggtaccgagccaggt
aaatctcccttggcaggaaactctgtctcagtcgatcgcaacttcatcgcccgggatatg
ttgaagttaaatgaataccttcattaccgaaccatcgatgtctcatcgattaaagagctt
gctcgtcgctggtacccaaagacctatttcgcagccccagccaagacgggcaatcaccgc
gcgttgggcgatattcgtgactcaatcgctgaactggcctactaccgccaagcgctattt
atcgattcagggcgcgagcaggtaaagtag

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