Candidatus Planktophila sulfonica: A1sIA56_04800
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Entry
A1sIA56_04800 CDS
T05158
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
psuf
Candidatus Planktophila sulfonica
Brite
KEGG Orthology (KO) [BR:
psuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psuf03019
]
A1sIA56_04800
03009 Ribosome biogenesis [BR:
psuf03009
]
A1sIA56_04800
Messenger RNA biogenesis [BR:
psuf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A1sIA56_04800
Ribosome biogenesis [BR:
psuf03009
]
Eukaryotic type
Pre-60S particles
RNases
A1sIA56_04800
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ASY16215
UniProt:
A0A249KHN4
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All DBs
Position
961458..962027
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AA seq
189 aa
AA seq
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MTAVLPHLIWIDCEMTGLDLTTDALVEIAVLVTDSDLNVIGDGVDVVIHATQGELDSMND
FVREMHTSSGLITEIPNGISMSAAEEQILTYLQSAGTEPGKSPLAGNSVSVDRNFIARDM
LKLNEYLHYRTIDVSSIKELARRWYPKTYFAAPAKTGNHRALGDIRDSIAELAYYRQALF
IDSGREQVK
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgtcttgccacacctgatctggatagattgcgaaatgactgggctcgatctc
acgaccgatgccctcgttgaaattgcagtcctcgttaccgactctgatttaaatgtgatt
ggtgatggcgttgatgtcgttattcatgcaacgcaaggtgaactcgattccatgaatgac
tttgttcgcgagatgcatacttcttcgggtctcataactgaaatccctaatggaatttcg
atgtcagcggctgaagaacagatacttacttatctgcaatcagctggtaccgagccaggt
aaatctcccttggcaggaaactctgtctcagtcgatcgcaacttcatcgcccgggatatg
ttgaagttaaatgaataccttcattaccgaaccatcgatgtctcatcgattaaagagctt
gctcgtcgctggtacccaaagacctatttcgcagccccagccaagacgggcaatcaccgc
gcgttgggcgatattcgtgactcaatcgctgaactggcctactaccgccaagcgctattt
atcgattcagggcgcgagcaggtaaagtag
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