Pseudomonas sp. VLB120: PVLB_05115
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Entry
PVLB_05115 CDS
T02897
Name
(GenBank) outer membrane porin
Organism
psv
Pseudomonas sp. VLB120
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Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
AGZ33830
UniProt:
A0AA86DSL1
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Position
complement(1161082..1162371)
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AA seq
429 aa
AA seq
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MLSSQPQAFAPTRYLSARPSAIASALALAGVAPMSQAAFFEDSTATFETRNMYFNRDFRD
GTSAQQSKRDEWAQGFMLNFESGYTEGTVGFGLDALGMLGVKLDSSPDRTDTGLLPTHDD
GKAADEYSKLGLTGKIKVSKTELKVGTLIPELPTLQPNDGRILPQTFEGGLLTSKEINHL
TFTGGRLEKAKDRNDTNWEDLALNNKNGRFGGTFSADNFDLAGLDYQFTDRITGSYHYAQ
LDDIYRQHFLGMVATQPWGPGTLGADLRLAVSDDQGAAKAGNIDNTTVNGMLSYALGGHK
VSAAYQHLSGDSAFPYVDGADPYLVNFVQINDFAGADERSWQVRYDYNFAALGIPGLTFM
TRYINGDNVSRADGSEGKEWERNTEFKYVVQSGPLKNVAVRLRNATFRSNFARDADEVRL
LVSYSVALW
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcatcgcagccgcaggcgttcgcgcctacccgttacctgtccgcacgtccaagc
gccatcgccagcgctcttgcccttgccggtgtcgcaccgatgagccaggccgctttcttc
gaagacagcacggccaccttcgaaacccgcaacatgtacttcaatcgcgattttcgcgat
ggcaccagcgcgcaacaatccaagcgcgacgaatgggcccagggtttcatgctcaatttc
gagtccggctacaccgaaggcaccgtaggcttcggcctggatgccttgggcatgctcggc
gtcaagctcgactccagccctgatcgcaccgacaccggcctgctgcccacccacgacgat
ggcaaggccgccgatgagtactccaagctcggcctcaccggcaagatcaaggtctccaag
accgaactgaaggtcggtaccctgattcccgaactgcctaccctgcagcccaatgacggg
cggatcctgccgcagaccttcgaaggcgggctgctgacttccaaagagatcaaccacctg
accttcaccggcgggcgcctggaaaaggccaaggaccgtaacgacaccaactgggaagac
ctcgccctcaacaacaagaacggtcgcttcggcggtaccttctccgccgacaacttcgac
ctcgccggactcgactaccagttcaccgaccgcatcaccggcagctaccactacgcccag
ctggacgacatctaccgtcagcacttccttgggatggtcgccactcagccatggggccca
ggcaccttgggcgccgacctgcgcctggcggtgagtgacgaccaaggcgcagccaaggcc
ggcaacatcgacaacaccaccgtcaacggcatgctcagctatgccctgggcgggcacaag
gtcagcgcggcttaccagcatctgtccggcgacagcgcctttccttacgtcgacggcgct
gacccgtacctggtcaacttcgtccagatcaacgacttcgccggtgccgacgagcgctcc
tggcaggtgcgctacgactacaacttcgccgcgctcggcattcccggcctgaccttcatg
acccgctacatcaatggcgacaacgtcagccgcgccgatggcagcgagggcaaggagtgg
gagcgcaacaccgaattcaagtacgtggtacaaagcggcccgttgaagaacgtcgccgtg
cgcctgcgcaacgccaccttccgctccaacttcgcgcgcgatgccgacgaagtgcggctg
ctggtgagctacagcgtagccctgtggtaa
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