Pseudomonas sp. VLB120: PVLB_07560
Help
Entry
PVLB_07560 CDS
T02897
Name
(GenBank) nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
psv
Pseudomonas sp. VLB120
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psv03400
]
PVLB_07560
DNA repair and recombination proteins [BR:
psv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PVLB_07560
Archaeal homologous recombinant proteins
PVLB_07560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AGZ34312
UniProt:
A0AA86AB60
LinkDB
All DBs
Position
complement(1703929..1705167)
Genome browser
AA seq
412 aa
AA seq
DB search
MRLFHTSDWHLGQSLHGQERDFEHACFLDWLLGQLRLRQPDALLIAGDIFDTVNPPVKAQ
ERLYDFIVQAHEQLPKLDIVMIAGNHDSGSRIELPAALMRRLRTHALGRVHWLDEGQLDA
ERLLIPLTNARGKVCAWCLALPFLRPAEVTGPQLGDDYLQGIHQVHQQLIGAAQQKRKKD
QALIAISHAHMAGGSVSEDSERSLIIGNAEALPAKLFDKAISYVALGHLHKPQKVNRENR
IRYSGSPIPLSFAEINYPHQVLEVELEGTELISVEARPVPRAVALQRLGPAPLGEVLQQL
ADLPMIDLLEDPNRQPWLEVRVRLDEPQPDLRQQIEQALHGKAVRLVRISAEYAGRGEQQ
DDDQAFVELAQMTPQDLFSRAWEQAYGSPVDEQALSDFALLLQDVQLEEELP
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtttcacacctccgactggcacctgggccaaagcctgcacggccaggaacgc
gacttcgaacacgcctgcttcctcgactggctgctgggccaactacggctgcgccaaccc
gatgcgctgctgatcgctggcgatatcttcgacacggtcaacccaccggtcaaagcccag
gagcgcctttacgacttcatcgtccaggcccatgaacagctgccgaagctggacatcgtg
atgatcgccggcaaccacgattccggctcgcggatcgaactgcccgccgcgctgatgcgg
cgcctgcgcacccatgccctgggccgcgtgcactggctcgacgaaggccagttggatgcc
gagcgcctgctcattccgctcaccaacgcccgcggcaaggtctgcgcttggtgcctggcc
ctgcccttcctgcgtccggcggaagtcactggcccgcagctgggtgacgattacctgcaa
ggtatccaccaggtacaccagcaactgatcggcgcagcgcagcaaaaacgcaagaaagac
caggcgctgattgccatcagccatgcacacatggccggcggctcagtctcggaagactcc
gagcggagcctgatcatcggtaatgccgaagccttgccggccaagctcttcgacaaagcc
atcagctacgtcgccctgggccacctgcacaagccgcagaaggtcaaccgcgagaaccgc
atccgctacagcggctcgccgatcccgctgtcgttcgccgagatcaactacccccaccag
gtactggaggtggagctggaaggcaccgagctgatcagcgtcgaagcgcgcccggtgccg
cgcgccgtggcactgcagcgcctgggccccgcgccgctgggtgaagtgctccagcagctc
gccgacttgccgatgatcgacttgctcgaagaccccaaccgccagccctggctggaagtg
cgcgtacgcctggacgaaccgcagcccgacctgcgccagcaaatcgagcaggccctgcat
ggcaaggccgtgcgcctggtgcgcatcagcgccgaatacgccggccgtggcgaacagcag
gacgatgaccaggccttcgtggaactggcgcagatgacgccgcaagacctgttcagccgc
gcctgggagcaggcctacggcagcccggtggacgagcaggccctgtccgacttcgccctg
ttgctgcaggacgtacagctcgaagaggaactgccatga
DBGET
integrated database retrieval system