Psychromonas sp. CNPT3: PCNPT3_08670
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Entry
PCNPT3_08670 CDS
T02515
Name
(GenBank) DNA-binding protein HU beta subunit
KO
K03530
DNA-binding protein HU-beta
Organism
psy
Psychromonas sp. CNPT3
Brite
KEGG Orthology (KO) [BR:
psy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psy03032
]
PCNPT3_08670
03036 Chromosome and associated proteins [BR:
psy03036
]
PCNPT3_08670
03400 DNA repair and recombination proteins [BR:
psy03400
]
PCNPT3_08670
DNA replication proteins [BR:
psy03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PCNPT3_08670
Chromosome and associated proteins [BR:
psy03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PCNPT3_08670
DNA repair and recombination proteins [BR:
psy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PCNPT3_08670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-DNA_bdg
LacI
HU-CCDC81_euk_2
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
AGH81672
UniProt:
M4U924
LinkDB
All DBs
Position
complement(2045740..2046015)
Genome browser
AA seq
91 aa
AA seq
DB search
MNKGQLIDNIAESADISKAAASRALDAFISSVTQALVEGDNVSLIGFGAFTVKDRAARTG
RNPQTGAPIEIKAAKVPAFKAGKSLKDAINA
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaggacaactaatcgataatatcgcagaaagtgcagacatttctaaagcggca
gcaagtcgtgctctggatgcttttattagttctgtaacacaagctttagttgaaggtgat
aatgtttctctcattggttttggtgcctttactgtaaaagatcgcgcagcacgcacagga
cgtaatcctcaaacgggtgctccgattgaaattaaagctgcaaaagttccagcctttaaa
gcaggtaaatcattaaaagatgcaatcaacgcttga
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