Psychrobacter sp. AntiMn-1: AOT82_888
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Entry
AOT82_888 CDS
T04964
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
psya
Psychrobacter sp. AntiMn-1
Pathway
psya03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psya00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AOT82_888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psya03400
]
AOT82_888
DNA repair and recombination proteins [BR:
psya03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AOT82_888
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AOT82_888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
DUF87
Kinesin
SWI2_SNF2
AAA
AAA_30
P-loop_SecA
Microtub_bd
Collagen_bind_2
Ish1
Motif
Other DBs
NCBI-ProteinID:
AOY43267
UniProt:
A0A1D9CXG5
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All DBs
Position
complement(1015659..1017770)
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AA seq
703 aa
AA seq
DB search
MRMPEPRSSRQLNQLAAQLQGEAEISGVNASGTKISSRAFEMVTDFEPAGDQPQAIEKLV
KGIDSGMDEQLLLGVTGSGKTYTMAKVISECQRPTIIMAHNKTLAAQLYGEFKSFFPNNA
VEYFVSYYDYYQPEAYVAASDTFIEKDSAINDHIDQMRLSATRALLERRDAIIVASVSCI
YGLGDPESYLKMLLHVVVGDQIDRTATIKRLVEMQYTRNELDFGRGTYRLRGELLDIYPA
ESEQLAVRVHLFDNEVEKITWFDPLTGKTVRSVPRITIYPKSHYVTPRNKLEAASETIRA
ELESRLEYFRENNKLIEAQRLKERTQYDLEMIQQLGYCNGIENYSQHLSGRPSGEAPPTL
FDYIPEDALLFIDESHVTVSQIGAMYKGDRSRKENLVNYGFRLPSAMNNRPMKFEEWERI
KPKTIYVSATPALYELEHSEQVVEQVVRPTGLIDPEIEIRPVLTQVDDVLSEITKRREKD
ERVLITTLTKRMSEDLTSYLKEYGVKVAYLHSDIDTVERMEIIHELRTGKYDVLVGINLL
REGLDMPEVSLVAIFDADKEGFLRSERSLIQTIGRAARHLNGKAILYADSITPSMQKAID
ETERRRDKQIAFNLEHNITPKGARRSITDKIDTGESLDANDNQAIPVKSNLPDVDINILH
SPDLLAKEIKRLEKQMQQMSRDLKFEEAAKTRDKVLELKAHLS
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgagaatgcctgaaccgcgctcatcgcgtcagttaaaccaattggccgctcagctccaa
ggcgaagctgaaatcagtggtgtcaatgcgtctggaacgaaaatatccagccgtgccttt
gagatggtcaccgattttgagccagcaggcgatcagccgcaagccatcgaaaagctggtc
aaaggtattgactctggtatggatgaacagctattgctaggtgtgacgggctctggtaaa
acttataccatggctaaggtcatctctgaatgtcagcgcccaaccatcatcatggcgcat
aataagacccttgccgcgcagctatatggcgagtttaagtcgtttttcccaaacaatgcg
gttgagtattttgtcagttattatgactactatcagccagaggcctatgtcgctgctagc
gatacctttatcgaaaaggacagcgccatcaatgatcacattgatcagatgcgtttgtct
gccactcgtgcactacttgagcgtcgtgatgcgattatcgttgcatcggtatcgtgtatt
tatggcttgggtgatccagaaagttatttaaaaatgctattgcatgtggtggttggtgat
cagatagaccgtaccgcaactattaagcgtttggttgaaatgcaatacacccgtaacgag
ttagattttggccgtggtacttatcgtttgcgtggtgaactgctagatatctatcctgct
gagtctgagcaactggcggtacgtgtgcatttgtttgacaatgaagtggagaaaatcacg
tggtttgatccgttaacgggcaagaccgtacgtagtgtgccgcgtattaccatttatcca
aaatcacattatgtgacgccgcgcaataagttagaagcggccagtgaaaccatacgcgct
gagcttgagtcgcgtttggagtattttcgcgaaaacaacaagctgattgaagcacagcgt
ctcaaagagcgtacccagtatgatcttgagatgattcagcagcttggctactgtaatggt
atcgaaaactactcacagcatctctctggtcgtccatcaggggaagcgccgccgacgttg
tttgattacattccagaagatgctctgctgttcatcgacgagtcacacgtgaccgtctct
cagatcggtgcaatgtataaaggggatagatcacgcaaagagaacttggtcaactatggc
tttcgtctgccaagtgcgatgaacaaccgcccgatgaagtttgaagaatgggagcgcatt
aagcccaaaaccatttatgtcagtgccacgccagcgctgtatgagcttgaacatagtgag
caggtggtagagcaggttgtacgtccaacgggtctgattgatcctgagatcgagatacgt
ccggtcttgacacaggtcgatgatgtgctgtctgagattaccaaacgccgtgaaaaagac
gagcgcgtattgattaccaccctgactaagcgcatgtcagaggacttgaccagctatcta
aaagaatatggtgtcaaggtcgcttatctgcattcagatatcgacacggtagagcgtatg
gagatcattcatgagctacgtactggtaagtatgatgtgttggtcggcattaacttgctg
cgcgaaggtttggatatgcctgaggtctcattggtggcgatattcgacgcagataaagaa
gggtttttgcgttctgagcgttcacttattcagaccattggtcgtgcagcacgtcatttg
aacggcaaggccattctctatgcagatagcattactccaagtatgcaaaaggcgatagat
gagacagaacgtcgccgcgacaaacagattgcttttaaccttgagcataatattacgcca
aaaggcgcgcgccgtagcatcactgataagattgatacaggcgaaagcctagatgccaat
gacaatcaggctatcccagtcaagagcaatttgcctgatgtcgatatcaatatcttgcat
agtcctgatttattggccaaagaaatcaaacgtcttgagaagcaaatgcagcaaatgtcg
cgtgatttgaaatttgaagaggcggcgaagacccgcgataaagtgctggagcttaaagca
catttgagctga
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