Psychrobacillus glaciei: PB01_06600
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Entry
PB01_06600 CDS
T06231
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psyo
Psychrobacillus glaciei
Brite
KEGG Orthology (KO) [BR:
psyo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psyo03032
]
PB01_06600
03400 DNA repair and recombination proteins [BR:
psyo03400
]
PB01_06600
Enzymes [BR:
psyo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PB01_06600
DNA replication proteins [BR:
psyo03032
]
Prokaryotic type
DNA Topoisomerases
PB01_06600
DNA repair and recombination proteins [BR:
psyo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PB01_06600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-C4_Topoisom
Toprim
Toprim_4
Auto_anti-p27
RNA_POL_M_15KD
Toprim_3
DUF2996
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QFF98522
UniProt:
A0A5J6SLG0
LinkDB
All DBs
Position
1480790..1482865
Genome browser
AA seq
691 aa
AA seq
DB search
MSDYLVIVESPAKAKTIERYLGKKYKVKASIGHVIDLPRSKMGVDVENDYEPKYITIRGK
GPVLQDLKKAAKKVKKVYLAADPDREGEAIAWHLAQALNVDIESDCRVVFNEITKDAILE
SFKHPRPIDMDLVDAQQARRILDRLVGYNISPILWKKVKKGLSAGRVQSVALRLIIDREN
EITNFIPEEYWTIEGQFEKGKKSFDALYYGSEKVKVKLTNEKEVKEVLDGMKGKKFEVTN
VVKKERKRNPAASFTTSSLQQEAARKLNYRARKTMMLAQQLYEGIDLGKKEGTVGLITYM
RTDSTRISDTAKAEAHAFIQNEYGSEYITSRNAEKQSKKAQDAHEAVRPTSVLRTPDQVK
AILSKDQYRLYKLIWERFIASQMESAILDTVAVDMKNGDAVFRANGSQVKFPGFMKVYVE
GSDDQTDDKDKLLPVLEVGDIVKSLAIDPKQHFTQPPPRYSEARLVKTLEELGIGRPSTY
APTLDTIQKRGYVALETKRFVPTELGTIVHKLVLEFFPNVLNIEFTAQMEKDLDSVEEGQ
VKWVQVIDGFYQDFAKHVEHADAEMEKIVIKDEPTGEDCEKCGSPMVYKLGRFGKFMACS
NFPDCRNTKAIVKEIGVPCPSCGEGQIVERKSKTKRIFYGCDRYPTCDFVSWDKPINRPC
PKCNDKLVEKKLKKGIQIQCVSCDYKEDPQS
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattatttagtaatagtggaatcgccagcaaaggcaaagacaattgaacggtat
ttaggaaaaaaatataaagtaaaggcatccatcggtcatgtaatcgatttaccaagaagt
aaaatgggtgtagatgttgaaaatgactatgaaccaaaatatattactatacgaggaaaa
ggccctgtattacaagatttaaaaaaagctgctaaaaaagtgaagaaagtctatctcgca
gctgaccctgacagagaaggggaagcaattgcgtggcatttagctcaagcattaaacgta
gacatcgaatcggattgtcgtgttgtatttaacgaaattacaaaagatgcaatattagaa
tcttttaaacacccaaggcctattgatatggatttagtagatgctcagcaagctagaaga
atattagaccgacttgttggatataacataagtcctattttatggaaaaaagtaaagaaa
ggtctttcggcaggtagagttcaatctgtagctttacgtttaattatcgatcgtgaaaat
gaaataactaattttataccggaagaatattggacaattgaagggcaatttgaaaaaggc
aaaaagtcctttgatgcactatactacggttctgaaaaagtaaaagtaaaacttacgaac
gaaaaagaggttaaagaagtattagacggtatgaaaggtaaaaagtttgaagtgaccaat
gtggtaaaaaaagagagaaaaagaaaccctgcggcatccttcacaacttcttctcttcaa
caagaggcagcaagaaagctaaattatagagcaagaaaaacaatgatgctcgctcaacaa
ttatatgaaggtatcgacttagggaaaaaagaaggaactgttggtctaataacttatatg
aggacagattctacaaggatttcggataccgcaaaagctgaagctcatgcgtttattcaa
aatgaatatggcagcgaatacattacatcaagaaatgccgagaaacaatctaaaaaagca
caagatgcacatgaagcggttagaccaacaagtgttttaagaacaccagatcaagtaaaa
gcgattctatctaaagatcagtaccgtttatacaaattgatttgggagcgtttcatcgcg
agtcaaatggaatctgcaatactagatactgttgcggtagatatgaaaaatggagatgcg
gtgttccgtgcaaacggttcacaagtgaaatttccgggattcatgaaagtatatgtagaa
ggttctgacgatcaaaccgacgataaagacaaattactacctgtgttagaggtcggagat
atagtgaaatcattagctatcgatcccaaacaacattttacacagccgccaccaagatat
tcagaggcaagattagtaaaaacgcttgaagaactgggtattggtaggccttctacatat
gctccaactctggataccattcaaaaaaggggctatgttgctttagaaacaaaacgtttt
gtaccaacagagctgggaacgattgttcataaactagttttagaattttttcctaatgta
ttgaatattgagtttacggcacaaatggaaaaagacttagatagtgtagaagagggacaa
gttaaatgggttcaagtaattgacgggttttatcaagactttgcgaaacatgtggagcat
gcagatgctgaaatggagaaaatcgtcattaaagatgaaccaacaggagaagattgtgaa
aaatgcggctctccaatggtttataaattaggacgatttggcaaatttatggcttgtagt
aatttcccagattgccggaatacgaaagcaattgtaaaagagattggtgtaccttgccca
tcttgtggagaaggacaaattgtagaacgtaaaagtaaaacgaaacgaattttttatggt
tgtgaccgatatccgacatgtgattttgtatcatgggataagccgataaatagaccatgt
ccaaaatgtaatgataagttagtagaaaagaaattgaaaaaaggcatacaaattcaatgt
gtttcttgtgattacaaagaagatccacagagttaa
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