Psychrobacillus glaciei: PB01_20095
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Entry
PB01_20095 CDS
T06231
Name
(GenBank) RNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
psyo
Psychrobacillus glaciei
Brite
KEGG Orthology (KO) [BR:
psyo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psyo03016
]
PB01_20095
Enzymes [BR:
psyo01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
PB01_20095
Transfer RNA biogenesis [BR:
psyo03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
PB01_20095
Prokaryotic type
tRNA splicing ligases
PB01_20095
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
QFG01268
UniProt:
A0A5J6SY58
LinkDB
All DBs
Position
4184916..4186007
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AA seq
363 aa
AA seq
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MEIKGTYNNALVYTDTIEETAKVQVEQICSLPFLKDTKIRMMPDLHAGKGCTVGTTMTIT
DKVVPNFVGVDLGCGMICAKLDVLKEGIHFEKLDKTIKKNVPSGTRIRNKEHRNSIEIPF
AEVAAPINENRARLSLGTLGGGNHFIELNEGKDGSIYLVIHSGSRNLGKQIAEHYQEVAH
QTLGDSVSKDLAYVEGENMKDYLFDLSIAQKYAAFNRKTMVEVICRGMNWNIESEFDTIH
NYIDLDNMILRKGAISAQDGEIVIIPMNMRDGSLICRGKGNPDWNYSGPHGAGRIMSRSQ
ARKLVALEDFQASMKDVWSTSVVSSTVDESPFAYKDMQDILSHIDDTVEVLEVIKPIYNY
KAH
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atagaaataaaaggaacatataataatgcgcttgtttatacagacacaatagaagaaaca
gcaaaggtacaagtagagcaaatttgtagtcttccctttttaaaagacacgaaaataaga
atgatgccagatcttcatgcaggtaaaggttgcactgtaggaacaacgatgacaattaca
gacaaagtggttcctaactttgttggcgtcgatttgggttgcggaatgatctgtgcaaag
ctagatgttctaaaggaaggtatacactttgaaaagttagacaaaacaatcaagaaaaac
gtaccaagtggtactcgcattagaaataaagaacatcgcaattctatagaaatacctttt
gctgaagtcgctgctcctattaatgaaaatcgcgctcggttaagcttaggcactcttggt
ggaggaaaccatttcattgaattaaacgaaggcaaagacggtagtatttatttagttatc
cactctgggagcaggaatttagggaaacaaattgcagagcattatcaagaagtagcacat
caaacccttggtgatagtgtctctaaagatttggcatatgtagagggagaaaatatgaag
gattatttatttgatctttccattgctcaaaaatatgcagcattcaatcgcaaaacaatg
gtcgaagttatttgtagaggtatgaactggaatattgaatctgaattcgacacgattcat
aactatattgatttagataatatgatcttacgtaaaggtgccatctctgcgcaggatggt
gaaattgtaataattcctatgaatatgcgagatggttcgctcatttgccgaggaaaagga
aatccagattggaattactctggtccacacggtgccggacgtataatgagtcgatcgcaa
gcaagaaaactagtagcattggaagatttccaagcttctatgaaggatgtttggagtact
tctgttgtttcaagtacggtcgatgaatccccatttgcgtataaagatatgcaagacatt
ctttcacatattgacgatacagttgaagtattggaagtaataaaaccaatttataactat
aaagcgcattaa
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