Pseudomonas syringae CC1557: N018_11570
Help
Entry
N018_11570 CDS
T03014
Name
(GenBank) glycogen debranching protein
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
psyr
Pseudomonas syringae CC1557
Pathway
psyr00500
Starch and sucrose metabolism
psyr01100
Metabolic pathways
psyr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
psyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
N018_11570
Enzymes [BR:
psyr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
N018_11570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
Glyco_hydro_31_2nd
GHL5
Motif
Other DBs
NCBI-ProteinID:
AHG40848
UniProt:
W0MUY2
LinkDB
All DBs
Position
complement(2487180..2489363)
Genome browser
AA seq
727 aa
AA seq
DB search
MNTKSTPAAEESSATHDNPASTPTRIREGLPFPLGASWDGLGVNFALFSANATKVELCLF
DSTGEVELERIELPEYTDEIYHGYLPDAHPGLIYGYRVYGPYDPKNGHRFNHNKLLIDPY
AKQLVGELKWSEALFGYTIGHADGDLSFDERDSAPFVPKSKVIDEAYTWGRDQRVGTPWD
KTIFYETHVRGITMRHPEVAEELRGTFAGLGSAPVVEHIRKLGVTSVELLPIHAFVNDQH
LLQKGMTNYWGYNSIAFFAPDPRYLASGKIAEFKEMVAHLHHAGLEVILDVVYNHTAEGN
ELGPTLSMRGIDNASYYRLMPDDKRYYINDSGTGNTLDLSHPCVLQMVTDSLRYWASEMH
VDGFRFDLATILGRYHDGFDERHSFLVACRQDPVLRQVKLVAEPWDCGPGGYQVGGFPPG
WMEWNDKFRDTVRAFWKGDEGQLADFAARMTASGNMFNQRGRRPQASVNFITAHDGFTLH
DLVSYNDKHNEANDENNQDGSNNNLSWNHGVEGPTEDQEINTLRLRQMRNFFATLLLAQG
TPMIVAGDEFARTQHGNNNAYCQDSEIGWINWDLDEDGEALLKFVTRVIKLRQTYPILRR
SRFLVGDYNEEIGVKDVTWLAPSGEEMSVEQWHDANGRCLGMLMDGRAQETGIRRPGADA
TLLLVVNAHHDGVNFTLPEVPEGTHYECLIDTNQDDARSKEQFAFGSEYTVTPRSLLLFE
LKHEDQQ
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgaagtccacaccagcggcggaagaaagttcggccacgcacgataaccctgcc
agtaccccgacacgcattcgcgaaggacttccctttccactcggtgccagctgggatggc
ctgggcgtaaactttgccctgttttcggcaaacgccaccaaagtggaactctgcctgttc
gattcgaccggcgaagtggagctggagcgcatcgagcttccggaatacaccgacgagatc
taccacggttacctgcccgacgcgcatcccggcctgatctacggctaccgcgtgtacggc
ccgtacgatccgaagaatggtcaccgtttcaaccacaacaagctgctgatcgacccgtac
gccaagcaattggtcggcgaactgaaatggtcggaagcactgttcggttacaccattggc
cacgctgatggcgacctgagcttcgacgaacgcgacagcgctccgttcgtacccaaaagc
aaagtgatcgacgaggcctacacctggggccgcgaccaacgcgttggcacgccttgggac
aagaccattttctacgagacccacgtgcgcggcatcaccatgcgccacccagaggtagcc
gaagagctgcgcggcacgtttgccggtctggggtcagcgcctgtcgtcgagcacatccgc
aagctgggcgtgacctcggtcgaactgttgccgatccatgcgttcgtcaacgaccagcac
ctgctgcaaaaaggcatgaccaactactggggctacaacagtattgcgtttttcgccccg
gacccgcgttacctggccagcggcaagattgccgagttcaaggaaatggtcgcgcacctg
caccatgccgggctggaggtcattctcgatgtggtctacaaccacaccgccgaaggcaac
gagctgggccctaccctgtccatgcggggtatcgacaacgcctcctattacaggctgatg
ccggacgacaagcgttactacattaacgattccggtacaggcaacacccttgacctgagt
cacccgtgcgttctgcagatggttaccgattcgctgcgttactgggcctcggaaatgcac
gtcgatggtttccgcttcgacctggcaacgattctcggtcgctaccatgacggtttcgac
gagcgtcacagcttcctggtcgcctgccgccaggacccggttctgcgtcaggtcaaactg
gttgccgagccttgggactgcggtccgggtggctaccaggtcggtggcttcccaccgggc
tggatggaatggaacgacaagttccgtgacaccgtgcgtgccttctggaaaggcgatgaa
ggccaactggccgactttgctgcgcgcatgacggcctccggcaacatgttcaaccagcgc
ggtcgtcgccctcaggcttcggtgaatttcatcaccgcgcacgatggcttcacgctgcac
gacctggtgtcgtacaacgacaagcacaacgaagcgaacgacgaaaacaaccaggacggc
agcaacaacaacctgtcctggaaccacggcgttgaaggtccgaccgaagatcaggaaatc
aataccctgcgtctgcgccagatgcgcaacttcttcgccacgctgctgctggcacaaggc
acaccgatgatcgtggcgggtgacgagttcgcccgcactcagcacggtaataacaacgcc
tactgccaggacagcgagattggctggatcaattgggatctggacgaggacggcgaggcg
ctgctcaagttcgtgacccgcgtgatcaagctgcgtcagacctacccgatcctgcgtcgc
agtcgcttcctggtgggcgattacaacgaagaaatcggcgtcaaggacgtcacctggctt
gcgccgagcggcgaagaaatgagtgtcgagcaatggcacgatgccaatggccgttgcctc
ggtatgctgatggatggccgcgcacaggaaaccggtatccgccgtcctggtgcagacgcc
accttgctgctggtcgtcaacgcacatcatgacggcgtcaacttcacgctgccggaagtg
cctgaaggcacgcattatgagtgcctgatcgataccaatcaggacgatgcgcgcagcaag
gagcagtttgccttcggttcggaatacaccgttaccccgcgctcactgttgcttttcgaa
ctgaagcatgaagatcagcaatga
DBGET
integrated database retrieval system
