Pseudomonas syringae CC1557: N018_16510
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Entry
N018_16510 CDS
T03014
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
psyr
Pseudomonas syringae CC1557
Pathway
psyr00071
Fatty acid degradation
psyr00280
Valine, leucine and isoleucine degradation
psyr00310
Lysine degradation
psyr00362
Benzoate degradation
psyr00380
Tryptophan metabolism
psyr00410
beta-Alanine metabolism
psyr00640
Propanoate metabolism
psyr00650
Butanoate metabolism
psyr00907
Pinene, camphor and geraniol degradation
psyr00930
Caprolactam degradation
psyr01100
Metabolic pathways
psyr01110
Biosynthesis of secondary metabolites
psyr01120
Microbial metabolism in diverse environments
psyr01200
Carbon metabolism
psyr01212
Fatty acid metabolism
Module
psyr_M00087
beta-Oxidation
psyr_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
psyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
N018_16510 (fadB)
00650 Butanoate metabolism
N018_16510 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
N018_16510 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
N018_16510 (fadB)
00310 Lysine degradation
N018_16510 (fadB)
00380 Tryptophan metabolism
N018_16510 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
N018_16510 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
N018_16510 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
N018_16510 (fadB)
00930 Caprolactam degradation
N018_16510 (fadB)
Enzymes [BR:
psyr01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
N018_16510 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
N018_16510 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
N018_16510 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
N018_16510 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AHG41716
UniProt:
W0MXY6
LinkDB
All DBs
Position
complement(3666872..3669037)
Genome browser
AA seq
721 aa
AA seq
DB search
MIYEGKAITVKALESGIVELNFDLKGESVNKFNRLTLNELRQAVDAIKADTSVKGVIVSS
GKDSFIVGADITEFVDNFKLPEAELVAGNLEANRIFSDFEDLGVPTVVAINGIALGGGLE
MCLAADYRVMSSSARIGLPEVKLGLYPGFGGTVRLPRIIGADNAIEWIASGKENAAEDAL
KVGAVDAVVAPEKLQAAALDLIQRAISGEFDYKAKRQPKLDKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMAKTSAAQSLIGLFLNDQEL
KKKAKAYDEVARDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDIREEAIQLGLNEASKL
LGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGTVDLVVEAVVENPKVKQAVLAEVEANVG
ENTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEEAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKRLGQKNGKGFYAYETDKKGKP
KKVNDPAVLEILKPIVYEQREVTDEDIVNWMMIPLCLETVRCLEDGIVETAAEADMGLIY
GIGFPPFRGGALRYIDSIGVAEFVALADRYAELGALYQPTAKLREMAANGQSFFGQASSE
V
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaattg
aatttcgacctcaagggtgagtccgtcaacaagttcaaccgtctcaccctcaatgaactg
cgccaggcggtggatgccatcaaggcagacacgtccgtcaagggcgtgattgtcagcagt
ggcaaggattcattcattgtcggtgccgacatcaccgagttcgtcgacaacttcaagttg
ccggaagccgaactggtggcaggcaatcttgaagccaacagaattttcagcgacttcgaa
gaccttggtgtacctaccgtcgtagccatcaacggcatcgcgctgggtggcgggctggaa
atgtgcctggccgctgactaccgcgtcatgtccagcagcgcgcgcatcggcctgcctgaa
gtcaagctgggcctgtacccgggcttcggcggcaccgtgcgtctgccacgcatcatcggc
gctgacaacgctattgaatggatcgcatctggcaaggaaaacgcagcagaagacgctttg
aaagtcggtgctgtcgatgcggtggttgcgcctgaaaaactccaggcggcggcacttgat
ctgatccagcgcgccatttccggtgagttcgattacaaagccaaacgccagccaaaactg
gacaagctcaagctgaatgccatcgagcagatgatggcattcgaaaccgccaagggtttt
gtcgcaggtcaggccgggcccaattatccggcccccgtcgaagccatcaagaccatccag
aaagccgccaacttcggtcgtgacaaggcgctggaaatcgaagccgccggtttcgtgaaa
atggccaagacctccgctgcacagagcctgatcggcctgttcctgaacgatcaggagctg
aaaaagaaagccaaggcctacgatgaagtcgctcgcgacgtgaaacaggctgccgttctg
ggcgccggcattatgggcggcggcattgcctatcagtcggcggtcaaaggcacgccgatc
ctgatgaaggacatccgcgaagaagccatccagctggggctgaacgaagcctccaagtta
ctgggcggccgtctggaaaaaggccgtctgaccgctgcgaagatggccgaagcgctaaac
gcgattcgtcctacgctgtcctacggcgatttcggcactgtcgatctggtagtcgaagcg
gttgtagaaaatccgaaggtcaagcaggccgtgctggccgaggtcgaagccaatgtaggt
gaaaacaccatcctggcttccaacacctctactatctcgatcagcctgttggcaaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaatccggtacacatgatgccg
ctggttgaagtcatccgcggcgagaagtccagcgaagaagcagtggcaaccaccgttgcc
tacgccaaaaaaatgggcaagaacccgatcgtggtcaacgactgcccaggcttcctggtc
aatcgcgtgctgttcccgtacttcggcggtttcgcccgtctggtcagcgcaggcgttgac
ttcgtgcgcatcgacaaggtcatggaaaagttcggctggccgatggggcctgcctacctg
atggacgtcgtcggtatcgacaccggccaccatggtcgtgacgtgatggctgaaggtttc
ccggaccgcatgaaagacgaccgccgctcggccatcgacgtcttgtacgaagccaagcga
ctgggtcagaagaacggcaagggtttctacgcctacgagacggacaagaagggcaagccg
aaaaaggtcaacgacccggctgtgctggagatactcaagccgattgtctacgaacagcgc
gaagtgactgacgaagacatcgttaactggatgatgattccgctctgcctggaaacggtt
cgctgcctggaagacggcatcgtcgagacggctgccgaagccgacatgggtctgatctac
ggcatcggtttccctcctttccgtggcggtgcgctgcgctatatcgattccatcggtgtg
gccgaatttgttgccctggctgaccggtacgccgagctgggtgccctgtatcaaccgacc
gcgaagctgcgcgaaatggccgccaacggccagagcttcttcggtcaagcgtcttccgag
gtatga
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