Psychrobacter sp. YP14: DLE54_00215
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Entry
DLE54_00215 CDS
T05488
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
psyy
Psychrobacter sp. YP14
Brite
KEGG Orthology (KO) [BR:
psyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psyy03009
]
DLE54_00215
Enzymes [BR:
psyy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
DLE54_00215
Ribosome biogenesis [BR:
psyy03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
DLE54_00215
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF6833
Motif
Other DBs
NCBI-ProteinID:
AWT48103
LinkDB
All DBs
Position
55847..56551
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AA seq
234 aa
AA seq
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MRLDKFISKATELSRKEAKKVLHASEITVNDEVVKDGSVHVDVLNDEVMWAGEPLSVATG
SRYILLHKPEGFECTLKPKEYPIVTELIAVPELSNLRIAGRLDVDTTGALILSDDGSWLH
RVTSPRHLHEKVYELTLADAMDEEAQAHAIKKVGQGILLDGDYEPTKPALLEFIDETHAR
LILTEGKYHQVKRMMAYFGNKVVELHRASIGGITLEGLEKGDSRFLTEDEVNSF
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttagacaaatttatcagcaaggccaccgaactgtcccgtaaagaagcgaaaaaa
gtgctgcacgccagtgagattacggtcaatgatgaagtagtaaaagatggcagcgtacac
gttgatgtgcttaatgatgaagtgatgtgggccggtgagccgttatcagtggcgaccggt
agccgctatattttattgcataagcctgaaggctttgagtgtaccctaaaacccaaagaa
tatccgattgttactgaacttatcgcagtgcctgagctgagtaacttgcgtatcgcaggc
cgtcttgatgtggataccaccggtgccttaatcttaagtgatgatggcagctggctacac
cgagtgaccagcccgcgtcatctgcatgaaaaggtgtatgaattaaccttagccgatgct
atggatgaagaggcgcaagcgcatgcgatcaaaaaagtaggccaaggcatcttgctagat
ggcgattatgagccgaccaagcctgcgttattagaattcattgatgagacccacgcgcgt
ctaattttgaccgaaggtaaataccatcaagtcaaacgtatgatggcctattttggcaat
aaagttgttgagctacaccgtgccagcattggcggcataacacttgaaggattagagaaa
ggcgatagccgcttcttgaccgaagatgaggtaaatagcttctaa
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