Psychrobacter sp. YP14: DLE54_00295
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Entry
DLE54_00295 CDS
T05488
Name
(GenBank) DNA polymerase III subunit chi
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
psyy
Psychrobacter sp. YP14
Pathway
psyy03030
DNA replication
psyy03430
Mismatch repair
psyy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psyy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DLE54_00295
03430 Mismatch repair
DLE54_00295
03440 Homologous recombination
DLE54_00295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psyy03032
]
DLE54_00295
03400 DNA repair and recombination proteins [BR:
psyy03400
]
DLE54_00295
Enzymes [BR:
psyy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DLE54_00295
DNA replication proteins [BR:
psyy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DLE54_00295
DNA repair and recombination proteins [BR:
psyy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DLE54_00295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_chi
Motif
Other DBs
NCBI-ProteinID:
AWT48119
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All DBs
Position
complement(74301..74801)
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AA seq
166 aa
AA seq
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MQISFYVLGERYLNDNAAASSTASAANAEAVLNFVCRLTQTVLQKSEHSLVIVDDQVERL
KQLDTQLWSFDPVSFVAHDFILEEAAVSQLSAPVSLVSTLPKGFDGVILNLAATPLPLSV
ETTAAVLPERVLEIITPDEAGKQLGRDKYRAYQQLGFELNYFPINK
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattagtttttatgtgttgggtgagcgttatcttaacgataacgccgctgcatca
agcactgcctcagcagccaacgccgaggcagtgcttaactttgtgtgccgattgacccag
acggttttgcaaaaaagcgagcacagtttggtcatcgttgacgatcaagtagagcgtctt
aaacagcttgatactcagctgtggtcttttgacccagtcagcttcgtcgctcatgatttt
atcttagaagaagccgctgtcagccagctgtcggcacctgttagcttggtatcaacgctg
cctaagggttttgatggcgttattttaaaccttgctgccactccccttcccttatctgta
gaaacgacagccgctgtgctgccagaacgggttcttgaaatcattacccccgatgaggca
ggcaagcaacttggccgtgacaagtaccgtgcctatcagcaactgggctttgagcttaac
tattttccgatcaataaataa
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