Psychrobacter sp. YP14: DLE54_01270
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Entry
DLE54_01270 CDS
T05488
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psyy
Psychrobacter sp. YP14
Pathway
psyy03420
Nucleotide excision repair
psyy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psyy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DLE54_01270
03430 Mismatch repair
DLE54_01270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psyy03400
]
DLE54_01270
Enzymes [BR:
psyy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DLE54_01270
DNA repair and recombination proteins [BR:
psyy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DLE54_01270
MMR (mismatch excision repair)
Other MMR factors
DLE54_01270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
DEAD
Motif
Other DBs
NCBI-ProteinID:
AWT48292
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All DBs
Position
complement(294334..296547)
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AA seq
737 aa
AA seq
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MTDSLFSTHHYSYPTLDDTIRQKMAHLQQSIAKLESNLITPESMSKRLSNTVDDHKIADK
HLASHNSVLAQSEVDYAGELNPSQLLAATTTEGKVLVIAGAGSGKTKTLTYRTSYLIESG
ASPSSILLLTFTRKAANEIKGRVKSLLAESFADNRALSGLDLNAITSGTFHSFCNMLLRR
YSGLLGINPKFTILDTGDSEDALDMICKEQGIVRKNMKQAFPRKKTLQNLISTSRNRHIL
LRDLIENDYPDIAIHIPLIEDLAIAYHKYKRANHLYDFDDIISQVVYHLKNNLQFRKLIQ
DTYRHVMVDEYQDTNIPQKQLIDYLCEPDNVSLMVVGDDNQSIYAFRGANYENILLFADG
YPDAKLIKLEQNYRSTPAILDYVNALSEHITLGYQKKLFSNLATEGEKPTLCRRSNDKQE
AVYIADKIIELKPEYDFNDFAVLSRTSFQSNEIQLQFMQRNIPFIVVGGIKFIEKRHIKD
ILGLVKILYNPNDTIAWHRILTLFSGVGDVTASKITQAITSSNDSLQPLLDPKLTKNKAP
INELYHVLIKAQQQATVADILQTLIDFYAPILKTLEDNWRERSEDFRVLINLAQEHSSLD
NFLENLALDPPNDSVAVMTNPEDKQTDAVTISTIHSAKGLEWPVVFVNALVDGLMPHHRS
LHEFEALEEERKLFYVACSRAKTHLYLTAPDYFSSFAGYFDKISRFVSEVATDTLQVDTA
ESIRKSDDSQSNDPEWW
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgaccgactctttattttcgacccaccattacagctaccctacgcttgatgacaccatt
cgtcaaaaaatggcgcatttacagcagtctatcgccaagcttgagtcgaatttaatcacc
ccagagtccatgagtaaacgcttatcaaacacagtagatgatcataaaatagctgataag
cacttagcttcacacaacagcgtattggcacaaagcgaagttgattatgctggcgaactc
aacccaagccagctactggccgccaccaccaccgaaggtaaggtattggtcattgctggc
gccggctctggtaagaccaaaaccctcacctaccgcaccagttatttgattgaaagcggg
gcgtctccaagcagtattctgctgctgacctttactcgaaaagcagccaacgaaatcaag
ggccgtgtcaaaagcctgttggccgaaagctttgccgataatcgcgcgttaagcggcctg
gatctgaatgccattaccagcggcacctttcactctttttgtaatatgctgctgcgccgc
tattcaggcttactgggcatcaaccctaagtttacgattttggacaccggtgatagcgaa
gatgcgctggatatgatttgcaaagagcaaggcattgtgcgcaaaaacatgaagcaggct
tttccgcgcaaaaagaccctacaaaatctcatctccacctctcgcaaccgtcatatctta
ctgcgcgatttgattgaaaatgactatcctgatatcgccatccatattccgctgattgaa
gatctggcaatagcgtatcacaagtataagcgtgccaatcatttatacgactttgacgat
attatcagccaggtggtttatcatctaaaaaacaacctgcaatttcgcaagctgattcaa
gacacctaccgtcatgtcatggtagatgagtatcaagataccaacattccccaaaagcag
ttaatcgactatctctgtgagcctgataacgtgtcgctgatggtggtcggtgatgacaac
caaagtatttatgcgtttcgcggcgccaattacgaaaatattctactgtttgccgacggt
tatcccgacgctaagctgattaaacttgagcaaaactaccgcagcacgcctgccatttta
gactacgtcaatgcgctgtctgaacacatcactttgggctatcaaaaaaagctgttttct
aacctagcgactgaaggtgaaaagccgacactgtgtcggcgcagtaatgacaagcaagag
gcggtttatattgctgataaaattatcgagcttaagccagagtatgattttaatgatttt
gcggtactaagccgcacctcgtttcagtccaacgagattcaactgcagtttatgcagcgc
aatatcccctttatcgtggtaggcggtatcaaatttattgaaaagcgccatatcaaagac
atcttggggctggttaagatattatacaaccccaatgacaccattgcttggcaccgtatt
ttaaccttgttcagtggcgttggtgatgtgaccgcatctaagattacccaagccattacc
agcagcaatgactcgttacagccgctactcgatcccaagctgaccaaaaacaaagcgccc
attaacgagctataccatgtgctaatcaaagcgcagcagcaagccactgtcgccgatatc
ttgcaaaccctgattgacttttatgcgcctattttaaaaaccttggaagacaattggcgg
gaacgctctgaggactttcgagtactgattaatttagcgcaagagcacagcagcttagat
aacttcttggagaatttagcactcgatccgcccaatgactcagtcgcggtaatgactaat
cctgaggacaaacagaccgatgcggtgactatttctaccattcatagcgccaagggtctt
gaatggccggtggtctttgttaatgccttagtcgatggcctaatgccgcatcaccgctct
ttgcatgagtttgaggcgttagaagaagagcgtaagctgttttatgtggcctgtagccgc
gccaaaacccacctatatttaaccgcccctgattatttttcaagctttgccggttacttc
gataagatatcccgctttgtcagtgaagtggccacagataccctacaagttgatactgca
gaatctataagaaaatctgatgactctcaatcaaatgaccccgaatggtggtag
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