Psychrobacter sp. YP14: DLE54_04075
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Entry
DLE54_04075 CDS
T05488
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
psyy
Psychrobacter sp. YP14
Brite
KEGG Orthology (KO) [BR:
psyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psyy03019
]
DLE54_04075
03009 Ribosome biogenesis [BR:
psyy03009
]
DLE54_04075
Messenger RNA biogenesis [BR:
psyy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DLE54_04075
Ribosome biogenesis [BR:
psyy03009
]
Eukaryotic type
Pre-60S particles
RNases
DLE54_04075
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AWT48788
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All DBs
Position
942905..943486
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AA seq
193 aa
AA seq
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MSDHPNKIRIKNQGKKGLIWIDLEMTGLDTMNDDIIEIATIVTDEDLNILAEGPVFAIKV
SDQKLNAMDDWNTKQHGQSGLIDRVRRSSVTLEQAEQETIAFLNKWVDEGKSPMCGNSIC
QDRRFLARQMPQLERFFHYRNLDVSSIKELCYRWRPDILKGVEKTGSHLAMDDIRDSIRE
LKHYRQHFFKLLD
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaccaccccaacaaaattagaattaagaatcaaggcaaaaaagggcttatctgg
atcgatttagaaatgaccggcctagacacaatgaatgatgacatcattgaaattgcgacc
atagtcaccgatgaggatttaaacatattggcagaaggtccagtatttgccattaaagtc
tcagaccaaaagctaaacgcgatggatgactggaataccaagcagcatgggcagtcaggc
ttaattgatagggtgcgccgtagcagcgtaactttagagcaagccgagcaagaaaccatt
gcctttttgaataaatgggtcgatgagggtaagtctccaatgtgtggcaactcaatctgc
caagaccgccgttttttagcgcgtcagatgccgcagctagagcgcttttttcattaccga
aacctagatgtgtcctctatcaaagagctgtgctatcgctggcgacctgatatcttaaag
ggtgttgaaaaaacgggcagccacttagcgatggatgatattcgtgattctattcgtgag
ttgaagcactatcgtcagcattttttcaaactgttggattaa
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