Stutzerimonas stutzeri ATCC 17588 = LMG 11199: PSTAB_3055
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Entry
PSTAB_3055 CDS
T01571
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
psz
Stutzerimonas stutzeri ATCC 17588 = LMG 11199
Pathway
psz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PSTAB_3055 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psz03400
]
PSTAB_3055 (xseA)
Enzymes [BR:
psz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
PSTAB_3055 (xseA)
DNA repair and recombination proteins [BR:
psz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
PSTAB_3055 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
FlgN
Motif
Other DBs
NCBI-ProteinID:
AEJ06336
UniProt:
F8H8X8
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All DBs
Position
3265402..3266778
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AA seq
458 aa
AA seq
DB search
MLKDPFQRLNLDREVLTVSQLNGRARLLLEDVFAQVWVEGEISNLARPASGHVYFTLKDR
NAQVRCALFRQNAARVRQALRDGLAVRVRGKVSLFEGRGDYQLILDMLEPAGDGALRLAF
EALKEKLAAEGLFSAERKAALPAHPRRIGIVSSPTGAVIRDIISVFRRRAPQVELTLIPT
AVQGREATGQIVRALQLADAQGFDALILARGGGSLEDLWCFNEEAVARAVDACVTPIVCA
VGHETDVSIADFVADVRAPTPSAAAELLAPSSADLQQRLNGLQQRLVLRMRDRLHRDAMR
LDGLTRRLRHPGERLQQQAQRIDDLEQRLLRALDRRLCSGQERLARLETRLAAQHPGRTL
NLLRQRLDHLSSRLPRAMQANIKGRRQQLQGLAQTLNVVSPLATLSRGYSILLDDRGQAI
RSASQTQPGQRLKARLGDGELDVRVEDNHLQPVTLPLL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaagatcccttccagcgcctcaatctcgatcgcgaagtgctgaccgtcagtcag
ctcaacggtcgcgcccgcctgttgctcgaggacgtgttcgcccaggtctgggtcgaaggc
gagatttccaacctcgcccgccccgcctccggccacgtctatttcaccctcaaggacagg
aacgcccaggtgcgctgcgccctgttccgccagaatgccgcgcgggtacgccaggcactg
cgcgacggcctggcggtgcgggtgcgtggcaaggtctcgctgttcgaaggccgtggcgac
tatcagctgatcctcgacatgctggagccggccggcgacggcgcactgcgcctggccttc
gaagcgctgaaggaaaagctcgccgccgaaggcctgttctccgccgagcgcaaggccgcc
ctgcccgcccatccgcggcgcatcggcatcgtcagctcaccgaccggcgcggtgatccgc
gacatcatctcggtgtttcgccgccgcgcaccgcaggtggagctgacgctgatccccacc
gccgtgcagggccgcgaagccactgggcagatcgtccgtgcgctgcagctggcggacgcc
cagggcttcgacgcccttatcctcgcccgcggcggcggctcgctggaagatctctggtgc
ttcaacgaggaagccgtggcgcgtgcggtggatgcctgcgtcacgccgatcgtctgcgcg
gttggccatgagaccgatgtgtccatcgccgacttcgtcgccgatgtgcgcgccccgacg
ccgtccgcggcggcagagctgctggcgcctagcagtgccgatctgcagcagcggctgaac
ggcctgcagcaacgtctggtactgcgcatgcgtgatcgcctgcaccgcgacgccatgcgc
ctggacggcctgacccgccgcctgcgccatcccggcgagcgtctgcagcagcaggcccag
cgtatcgatgacctggagcagcgcctgctgcgtgccctggaccgccgcctgtgcagtggc
caggagcgcctggcccgactggaaacacgcctggccgcgcagcatccggggcgcacgctg
aatctgctgcgccagcgcctcgaccatctgtcctcgcgcctgccgcgggcgatgcaggcc
aatattaaaggccgccgccagcagctgcagggcctggcccagacgctcaacgtggtcagc
ccgctggccacgctcagccgcggctacagcatcctgctcgacgaccgcggccaggcgatc
cgcagcgccagccagacgcaacccggccagcgcctcaaggccaggctcggcgacggcgag
ctcgacgtacgcgtggaagacaatcatctgcaaccggtcaccctgccgctgctctaa
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