Paenibacillus terrae: HPL003_08185
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Entry
HPL003_08185 CDS
T01668
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pta
Paenibacillus terrae
Pathway
pta03030
DNA replication
pta03430
Mismatch repair
pta03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPL003_08185
03430 Mismatch repair
HPL003_08185
03440 Homologous recombination
HPL003_08185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pta03032
]
HPL003_08185
03400 DNA repair and recombination proteins [BR:
pta03400
]
HPL003_08185
Enzymes [BR:
pta01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPL003_08185
DNA replication proteins [BR:
pta03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPL003_08185
DNA repair and recombination proteins [BR:
pta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPL003_08185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
RuvB_N
AAA_30
DnaX_C
TIP49
AAA_5
AAA_16
AAA_22
AAA_19
AAA_assoc_2
AAA_7
Rad17
AAA_14
AAA_2
nSTAND3
PIF1
AAA_24
AAA_28
AAA_18
Mg_chelatase
AAA_6
RNA_helicase
DUF815
TsaE
End3
VapE-like_dom
Motif
Other DBs
NCBI-ProteinID:
AET58400
UniProt:
G7VX22
LinkDB
All DBs
Position
1754039..1755790
Genome browser
AA seq
583 aa
AA seq
DB search
MEHIALYRAWRPQSFKDMVGQQHIIQTLQNAIRENRTSHAYLFSGPRGTGKTSAAKILAK
AINCEHGPAPEPCNECEACKRITAGAVMDVQEIDAASNRGVEEIRDLRDKVKYAPTEVRH
KVYIIDEVHMLTTEAFNALLKTLEEPPPHVMFILATTEPHRIPATIISRCQRFDFRRVSL
EEQTERLDLICRQENIEADSDALQYIARLSDGGMRDALSVLDQISSFTDGRVTYQQVLDM
TGGIASEQFGKLALALLKEDVSTVLQMIENFMQEGKSADKCMENLLYYFRDLLMIKMVPQ
ATKMTERVLEPEQFKEVAEAFTKEQLFSMIDTLNRYQSEMKYAVQPQTLFEVALLKLCSI
PGAAGAATQPTAQHSGAAANQEDVAVLKRQLAELEKKLERALQGGLAAGAGQDASSGSRQ
APGGRAPAPRISAPVKLPSQLDGYIAEKSGEAFAAVGRKWSQILQGVKEAKVTVHAWFMD
GEPVSVLEDSVLVAFKNNIHRETTEKPANKQVIEKVLHEQLGHPYRLVTMMQKDWNAAIE
GVPDQPAEEFQLEQEHDAPGKSKEPWIDEAIELFGEDLVVIKD
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
ttggaacatatagcgttgtaccgtgcttggcgacctcagtcgttcaaggacatggtagga
caacagcatattatccagacattgcagaatgccatccgcgaaaatcgcacgtcccatgcc
tacctgttcagcggtccgcgaggaacgggtaagacgagtgcggccaaaattttggccaag
gcaattaactgtgagcatggaccggcaccggagccttgcaacgaatgcgaagcctgtaaa
cggatcacggccggagcggtcatggatgtacaggagattgacgcagcctccaaccggggc
gttgaagagattcgtgatttgcgcgataaagtcaaatatgcgccgacggaagtacggcac
aaggtttatatcatcgatgaagtgcacatgctgacgacggaagcgttcaatgcgttgctt
aagacgctggaagaaccgccgccacacgtgatgttcatattggctacgacagaaccgcac
cgaattccggcgacgatcatttcgcgttgtcagcgttttgactttcggcgggtatcgcta
gaggagcagacagagcggcttgacctcatatgtcgacaggagaacatagaggctgattcg
gacgcattgcagtacattgcgcgtctgtcagatggcggaatgcgggatgcacttagcgtt
ctggatcagatatcttcgtttacagacggtcgggttacttatcagcaggtgctggatatg
acgggaggtattgcgtctgaacaattcggtaagcttgccttggcattgctgaaagaagat
gtcagcacagtactgcaaatgattgagaactttatgcaagaaggtaaaagcgcagataaa
tgcatggaaaatctgctgtactatttcagggatctgcttatgattaagatggtaccgcag
gcaactaaaatgacagagcgcgtgctggagccggagcagttcaaggaagtggcagaagct
ttcaccaaggagcagctttttagcatgatcgacacgcttaatcgctatcagagcgagatg
aagtatgccgttcagccgcaaaccttgtttgaggtagctctattgaagctgtgcagcatt
cctggggcagctggcgccgctactcagccaaccgcacagcattccggtgctgctgccaat
caggaagacgtagccgttttgaagcgtcagcttgccgagctggagaagaagctggaacgc
gcgttgcaaggcggattggctgccggggcagggcaggatgcatcgtcggggagccgccag
gcccccggagggcgtgcacccgctccgcggatttctgcgccagtcaagcttccttcgcag
ctagacggctatatcgccgagaagtctggggaggcatttgcggcagtggggcgtaagtgg
agccaaattttgcagggagtcaaagaagcgaaagtcacagttcatgcatggtttatggac
ggcgagccagtgtctgtattagaggatagtgtactcgtggcgtttaagaacaacattcac
cgtgaaactactgaaaagcctgccaacaagcaggtcattgagaaggttctgcacgaacag
ttgggccatccctatcgtctggtgaccatgatgcaaaaggattggaatgctgcgattgaa
ggagttcccgaccagcctgccgaagaattccaactggagcaggagcatgacgcgccggga
aagtccaaggagccctggattgatgaagctattgaacttttcggggaagatctggtagtt
ataaaggattaa
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