Candidatus Phycorickettsia trachydisci: phytr_2880
Help
Entry
phytr_2880 CDS
T05372
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
ptc
Candidatus Phycorickettsia trachydisci
Pathway
ptc03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
ptc00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
phytr_2880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ptc03011
]
phytr_2880
Ribosome [BR:
ptc03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
phytr_2880
Bacteria
phytr_2880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
S1_2
Myosin_N
Motif
Other DBs
NCBI-ProteinID:
AVP87244
UniProt:
A0A2P1P7K2
LinkDB
All DBs
Position
complement(330902..332641)
Genome browser
AA seq
579 aa
AA seq
DB search
MSQKIRKRFTPNIATEEQINQVATVSDFDSLISAETILPSKGSIIKGIVIGVENDIVVID
VGLKNEGRIPMSEFKLEINTPDPQVGDVVEIYVDKLEGINGKTVLSRAKAIREKAWQEVS
NSFAENKIVQGTIFERVRGGFAVDLCGVVAFLPGSQVDLRPVDANFIQELMASPQKFRII
KMDHKLGNIVVSRRAVLEDERSEAKKALLGKIVEGETVMEGVVKNITEYGAFIDLGSVDA
LLHITDISWKRINYPLEVLSIGQKVKVKVIKFDKETLRLHVGMKQLTESPWKQIASELPI
GKVLKGRISKVETFGAFVELKDDIEGLVHSTEISWSKNPPDPKKVLKVDQEIEYVVKEID
IDKHKISLSMKRCRPNPWQIFADNHSVGQVIKTKIRNIAENVGIFVALGDEIDGIIHLSD
ISWQAASNQELLKNYAKDQDIEAKILIIDVEKEQVRLGIKQLEQDPYEQLLSADKVDCVI
TKLNDDQVEVKTTDGLKGIIKRNELALDRAEQKISNFEVGQEIRAKALNYDKNSDVIFLS
IRELERKEHDEIIKTYGSIDSGSNNVINVSNIVGKEDKE
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaaaaataagaaaaagattcacacctaacatcgcaacagaagaacaaattaat
caagttgcaactgtttcagactttgattccttaataagcgcagaaaccatactgccatca
aaagggtcaattataaaaggcatagttataggagttgaaaacgatatagtcgttatagac
gttggtcttaaaaatgaaggaagaattccaatgtctgaatttaagctagaaattaatact
cccgatccacaagtaggagatgtagttgaaatttatgtcgataaactcgaaggaattaat
ggtaagaccgttttaagtagggcaaaagctatacgtgagaaagcctggcaagaagttagc
aacagttttgccgaaaacaaaattgttcaaggaactatttttgaaagagtacgcggtggt
tttgcagttgatttatgtggtgttgtagcattcttaccaggtagtcaagttgacttaaga
cctgttgatgcaaactttattcaagaattgatggcttcacctcagaaattccgtatcatc
aaaatggaccacaagttaggaaacattgttgtatcacgtagagccgtcttagaagatgaa
agatcagaagctaaaaaagcactcttaggcaaaattgttgaaggagaaactgtgatggaa
ggtgttgtcaaaaatattaccgaatatggagcgttcatagaccttggtagcgtagatgca
ttattacacattacagacatctcatggaaaaggattaattatcctttggaggtattatcc
ataggacaaaaagttaaagtcaaagttatcaaatttgataaagagactttaagattgcat
gtgggtatgaagcaattaactgaaagtccgtggaaacaaattgcttctgaattgccaata
ggcaaagtcttaaaaggacgtatcagtaaagtggaaactttcggcgcctttgtggaactg
aaagacgatattgaaggtttagtgcatagcacagagattagttggtccaaaaatccacca
gatcctaaaaaggttttaaaagttgatcaagagattgaatacgtggtcaaagagatagac
atagataaacacaaaatttctcttagtatgaagagatgcaggccaaatccatggcaaatt
tttgcagataatcattctgttggacaggttatcaaaacaaaaattcgcaatatagcagaa
aatgttggtattttcgtggcattaggagatgaaatagacggtatcatacatttatcagat
atttcatggcaggctgctagcaaccaagagctattaaaaaattatgctaaagaccaagat
attgaagctaagattttaattatagacgttgaaaaagaacaagtgcgtttaggtatcaaa
caacttgaacaagatccttatgaacaacttctttcagctgataaagttgattgcgtaata
acaaagttaaatgacgatcaggtagaagtcaaaacaacagatggtttgaaaggcattatt
aaacgtaatgaactagctttagatagagccgagcaaaagattagtaattttgaagttggt
caagaaattcgagcaaaagccttaaattatgataaaaattcagatgtcatatttttgtca
ataagagaactagaaagaaaggaacacgatgaaatcatcaaaacttatggctcaattgat
agtggtagcaataacgtcataaatgtttcaaatatcgtcggcaaagaagataaagaataa
DBGET
integrated database retrieval system