Candidatus Phycorickettsia trachydisci: phytr_660
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Entry
phytr_660 CDS
T05372
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ptc
Candidatus Phycorickettsia trachydisci
Pathway
ptc03420
Nucleotide excision repair
ptc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ptc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
phytr_660
03430 Mismatch repair
phytr_660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptc03400
]
phytr_660
Enzymes [BR:
ptc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
phytr_660
DNA repair and recombination proteins [BR:
ptc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
phytr_660
MMR (mismatch excision repair)
Other MMR factors
phytr_660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_11
AAA_12
AAA_30
ResIII
AAA_22
PcrA_UvrD_tudor
DEAD
Motif
Other DBs
NCBI-ProteinID:
AVP87029
UniProt:
A0A2P1P6Y3
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All DBs
Position
complement(92207..94231)
Genome browser
AA seq
674 aa
AA seq
DB search
MLDLSILNPNQKEAVLNTKGPLLVLAGAGTGKTTVITYKIAHLLAQSICTPNNILAVTFT
NKAAYQMQDRIMRLCGQKINYLGTFHSTALRILRTHANLIDLASNLTIIDYPDQIKLIKN
IYIDHNFDNNKLDYKAAHHLITSWKDLNLFPDQVDHHDKTAVAIYKHYQDRLQTANLADF
GDILLYVNKIFDQYESVLRMYQEQFDYILVDEYQDTNKIQYEWVRKIAGQKQNICCVGDD
DQSIYSWRGAQVSNILGFHKDFPNTQIITLSNNYRSTQRILDVAQSIISNNKDRYDKNLK
SSASHATNPIKLVCCTNSGSEAEFISQEILKLSHDSSVAVLVRTNFQTRILEDTFLRNRI
NYKIIGTTRFYELKEVKDVLAYIRATLNVNDDIALERIINVPKRGIGDASMAKFRANASD
HGISLHESIKMMLDAGSISKKGTTELEKLIQGLERWKKYFMELKASEAVEKILEESGYML
MLVQNTFEQGKVDNVKELLVTIGEYDDIYKFLEHAALVNEEKEEDSDFVVKVMTVHGAKG
LEFDTVFLPNWNQGIFPSSKGMSNLAEERRVAYVAVTRAKYNLYISYSTYMKTKDNYYAP
QSPSQFALEIKEDLLVKDSFPSFASPSKLNPGMKIFHKIFGAGLVVKELDYSKYEVAFKD
SGIKVIHKDFLSTT
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgttggatttaagtatactaaaccccaatcaaaaagaagcagtcctcaacactaaaggc
cctctcctagtccttgcaggagccggtactggtaaaactaccgttattacatacaaaatt
gcacatctcctcgcgcaaagcatttgcaccccaaataacatcctagctgttacatttact
aataaggcagcatatcagatgcaagatagaattatgcgactttgcggacaaaaaataaat
tatttaggcacgtttcattctactgctttaaggatcttaagaactcatgcgaatttaata
gatcttgcaagtaatttgactattatagattatccagatcaaattaagctaattaaaaac
atctacatagaccataactttgataacaataagctagattataaagcagctcaccatctt
attacctcatggaaagatttaaacctttttccagatcaagtagatcatcatgataaaaca
gcagttgctatttataagcactatcaagatcgactacaaacagctaatttagctgatttc
ggcgatattttactttatgtgaataagatttttgaccaatacgaaagcgtgctaaggatg
tatcaagagcaatttgactatatcttagttgatgagtatcaagatactaataaaatccaa
tatgagtgggtcagaaagattgctggtcaaaaacaaaacatatgctgcgtaggtgacgac
gatcaaagtatatatagctggcgaggtgcacaggttagtaatattttaggctttcataaa
gattttccaaatacccaaattattactctttctaacaattatcgctcaactcagcgaata
ctagatgttgcacaaagcattatatctaataataaagatcgatacgataaaaacttaaaa
agtagcgcttcgcatgcaactaaccctattaagcttgtatgttgcactaactctggtagc
gaagctgagtttatatctcaagaaattttaaaattatcgcatgattcttccgttgcagtg
cttgtgcgaacaaacttccagactagaattttagaagatactttcttgcgaaatagaatt
aattacaaaattataggcacaactaggttctatgaacttaaagaagtaaaagatgttctt
gcttacattagagctaccctaaacgtaaatgatgatatagctttagagcgtattattaac
gttcccaaaagagggataggcgatgctagtatggcaaaattcagagcaaatgcttctgat
catggaatatctctacatgaaagtatcaaaatgatgttggacgccggctcaatcagtaaa
aaaggaacaaccgaacttgaaaaactaatccaaggtcttgagagatggaaaaaatatttt
atggaactcaaggcaagcgaagccgttgagaagattttggaagagtctggttatatgcta
atgcttgttcaaaacacatttgaacaaggcaaggtggataacgtcaaagaattacttgtc
actattggggaatatgacgatatatataaattcttagaacatgccgcattggttaacgaa
gaaaaagaagaggatagcgatttcgttgttaaggttatgacagtgcacggagcaaaaggt
ctcgaatttgacacagtatttttgccgaattggaatcaaggaattttccctagcagcaaa
ggtatgagcaacttagccgaagagcgtagggtagcttacgtagcagtaacaagagcaaag
tataacctttatataagctattcaacttatatgaaaacaaaggataactactacgcaccc
caatctccttcccaatttgctttagagattaaggaagatttactagtgaaagattcattt
ccttcatttgcctccccttcaaaattaaaccctggtatgaaaatatttcacaaaattttt
ggagcaggactcgttgtaaaagaacttgattacagtaaatatgaggtagcatttaaagac
agcggaattaaagtaattcacaaagactttctaagcaccacatga
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