Candidatus Phycorickettsia trachydisci: phytr_6910
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Entry
phytr_6910 CDS
T05372
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ptc
Candidatus Phycorickettsia trachydisci
Pathway
ptc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
phytr_6910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptc03400
]
phytr_6910
Enzymes [BR:
ptc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
phytr_6910
DNA repair and recombination proteins [BR:
ptc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
phytr_6910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_C
ResIII
Helicase_C
PriA_3primeBD
PriA_CRR
AAA_30
AAA_19
nSTAND3
UvrD-helicase
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AVP87632
UniProt:
A0A2P1P8N1
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All DBs
Position
787114..789057
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AA seq
647 aa
AA seq
DB search
MTQILKVLLPLPNIPPLDYEYNLDEKIEVGDLVLAPFKSKEVTAIVFEIDPKEIFSGQLK
KVIKKHSFGLSHSFMSFIIKAKEYYLADFGQIAKMVLPMELENKYQPLQQEIPPEFNLSP
LNKAQEEALEKIKNSNRPSLLFGITGSGKTEVYFHLIAEEIAKGKQVLLILPEIALTQQI
LDRFEARFGFKSTTWHSSVTKTNKQKILKGIASGTVQVVIGARSSLFLPYKNLSLVIVDE
EHDQSYKQESLTHYNARDMAVLRGYLEGFKVLLGSATPSVESYHNATQNKYQLLYLDHRY
QNVLLPSIDIIDMRKEKLPEGRWISQSLKDQVERDLTKGEQVLLFLNRKGYAPVIICKSC
GHKVSCRHCSTYLVLHKSKERLECHRCGFYTKIFINCPECKTENSFIPCGPGIERLHEEA
IELFPGAKIIAISKDNFSNINEANDILSKIEKHEVDIIIGTQIITKGYHFPKLNFVGIID
VDLGFNNCDLKSFEYTFQLLQQVSGRAGRETAGRVLLQTYQKSSKIMDYVVSNNYQDFIE
YELENRSKGSMPPFSKVALVMIMAAKSDKAHGFAKELLYLAPKINDLKIWGPAPASLTKL
KGKYRYNLLVICSKNIALQQYLSSWISKIKVPWQINLKIDIDPYNLT
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgacccaaatcttaaaagttttgctccccttacccaatattcctccactagattatgaa
tataacttagatgaaaagatagaagttggcgatctagttttggccccatttaagagcaaa
gaggtaactgcaatagtttttgaaatagatcctaaagaaatcttcagtggacaattaaaa
aaggttatcaaaaaacattcctttggtttatctcatagctttatgagctttataattaaa
gctaaggagtattatttagcagattttgggcaaattgctaagatggttttaccaatggag
ttagagaataaatatcaaccactccagcaagaaatacctccagaattcaacttaagtcca
cttaataaagctcaagaagaagcattagaaaaaataaaaaattcaaataggccatcccta
ttatttggtatcaccgggtccggtaaaactgaggtatattttcacttaattgctgaagaa
atagcaaaaggcaaacaagttctattaattttaccggaaatagctctgacccaacaaata
ttagatagatttgaagcaagatttggatttaaaagcactacatggcatagttctgtcacc
aaaaccaataaacaaaaaatcttaaaaggtatcgccagtggcactgtgcaagttgtgatc
ggagcacgtagcagcttatttttaccatataaaaacttatctctcgttatagtcgatgaa
gagcatgatcagtcatataaacaagaatccttaactcattataatgctcgcgatatggct
gtgctgcgaggttacttagagggctttaaagtattgcttggctctgcaaccccttctgtt
gaaagctaccataatgctactcaaaataaatatcagctcttatatctggatcaccgctat
caaaacgtactcttgccaagcatagatattatcgacatgcgtaaagaaaagctccctgaa
ggtagatggatatctcaaagcttaaaagatcaagttgaaagagatttgaccaaaggcgaa
caagttttattattcttaaatcgcaaaggctatgcgccagttatcatctgtaaatcttgc
ggacataaagtcagttgccgccattgctccacctatttggtattacataaaagcaaagag
cgactagagtgccaccgctgtggattttatactaagattttcattaactgccccgaatgt
aagacagaaaacagctttattccttgtggacctggtattgaaagacttcatgaagaggca
attgaattattccctggagcaaaaattattgccattagcaaagataatttctctaacatt
aacgaagcaaatgatattttaagcaagattgaaaaacatgaggtagatattattattgga
actcagataataaccaaaggatatcactttcctaagctaaattttgtgggcattattgat
gttgatttaggttttaacaattgcgatcttaaatcctttgagtatacatttcagctatta
cagcaagtaagtggacgagccggacgtgaaacagcgggtcgggtattgcttcagacgtat
caaaaatctagcaagataatggattatgttgtaagcaataattaccaagattttattgag
tatgaacttgagaatagatcaaaaggatcaatgcctccattttctaaggtagcactagtt
atgataatggcagcaaaatcggacaaagctcatggttttgcaaaagagttattgtattta
gctccaaagataaatgatttaaaaatatggggtccagcacccgcatctttaaccaaacta
aaaggaaaatatagatataatttgctggtgatttgctctaaaaatatcgctttacaacaa
tatttaagtagctggatttctaagatcaaagtgccatggcagattaatctaaaaattgat
atagacccatataacctaacataa
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