Pseudoalteromonas tetraodonis: PTET_a2646
Help
Entry
PTET_a2646 CDS
T05282
Symbol
rpoE
Name
(GenBank) RNA polymerase sigma-70 factor, ECF subfamily
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
ptd
Pseudoalteromonas tetraodonis
Brite
KEGG Orthology (KO) [BR:
ptd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptd03021
]
PTET_a2646 (rpoE)
Transcription machinery [BR:
ptd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PTET_a2646 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_16
Phage_antitermQ
Motif
Other DBs
NCBI-ProteinID:
ATD03955
LinkDB
All DBs
Position
I:complement(2552308..2552889)
Genome browser
AA seq
193 aa
AA seq
DB search
MSEQELDLALVKRVQQGDKNAFNLLVKKYQNKIAGLISRYVSNQGDIADVAQEAFIKAYR
ALPNFRGDSAFYTWLYRIAVNCAKNYLVAQGRKPPANDIDADDAEFYEGADSMRSNASPE
NLLLSEEVRAVIFNTIDSLPEDLKTAITLREIEGMSYEEIAVVMDCPVGTVRSRIFRARE
AIDNKLNPLIGES
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcaggaattagatttagcgttagtgaaaagggttcagcagggagataaaaac
gcctttaacctattagttaagaagtatcagaacaagattgccggtttgatctcacgttat
gtatcaaatcagggtgacattgctgatgtagcacaagaggcgtttattaaagcgtatcgt
gcccttcctaattttcgtggtgacagtgctttttatacttggctttaccgtatcgccgtt
aattgtgctaaaaattacttagtggctcaagggcgtaaaccgccagcaaatgatatagat
gctgacgatgccgagttttatgagggtgctgattcaatgcgttcaaacgcatcacctgaa
aatttactattaagcgaagaagtacgcgctgttatttttaatacgattgatagtttgcct
gaagatcttaaaaccgcgattacccttagagaaattgaggggatgagctatgaagaaata
gccgtggtgatggattgcccagtcgggacggtgcgttcgcgtatttttcgtgcccgtgaa
gcaattgataacaaattaaacccattaataggcgagtcttag
DBGET
integrated database retrieval system
