Pyrenophora teres: PTT_08048
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Entry
PTT_08048 CDS
T01613
Name
(GenBank) hypothetical protein
KO
K26109
nuclear exosome regulator NRDE2
Organism
pte
Pyrenophora teres
Brite
KEGG Orthology (KO) [BR:
pte00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pte03019
]
PTT_08048
Messenger RNA biogenesis [BR:
pte03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
PTT_08048
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NRDE-2
Motif
Other DBs
NCBI-ProteinID:
EFQ94301
UniProt:
E3RIY3
LinkDB
All DBs
Position
Unknown
AA seq
996 aa
AA seq
DB search
MATNVPKFASFRPKPKAAPEPPKEPQHEKVGQSSKEKSTAPHSPTRKGGEQDAPANKAYF
RDRRGDLDIVRYGTLNRYDIPSYRRFGHGRVLGISTDQRIDRELSTEKAIYIIPAQGKRQ
KRLLTDKHASRSNERALKLVNINTDNDKLQQDFIFLSTKSKRKRSDTDDEDEAMPQTDYR
NTQGPKSGEPIDPDTRYESDADVTIDVEVTRKNTSLVRQTREHPEDISGWIALIAHQEAM
LKLERPSAELTDSDRAHLADIRISTYEEALKKIGKDYDGRLMLYTGLMKEAERAWDGAKL
ANKWKELLEKYPRSVNLWMMYLDYVQSKFTSYKYEDCRAIFLTCIGALSALGHDVSPSTI
LHILLRFTSMTHEAGYQELALAVWQALLEYHLMSPEGNVSTESFESFWDSEVPRIGEPGA
RGWKHHSLSDDAIPTDVSPLQEKDPSVSFFEDFTKRETDATAKLRFPGRASDNVAEDDAF
HTIFFDDLKPYLEAVPKGTPAALLIDAFLCFCGLPPLAISSIERGWWSDPFLQRHWQPSS
PSAEETTQFTQTLRRFMACPANSFRMTTELLFQQDFSLDGMNFSPDFIRRFFNLLISESM
GGGDMAGEYLLAFERQHFSKEAFKTAKRLLKGQPMHSRLYNAYGLVEASLGNSAKADQVF
HTVLFMQHGSTASLTSETLELFSSWVWQALYRGEQQEAFARTTLTEVSERALLDQDHTRA
VQSSALFALLAYLSNNCTARHALEVHHNLSAWFASHKLLNSPSAELHAQEIARFLTHHIT
HASIVKPSLIRTTLEPLISRFPNNTILLSLYAANEARFSIDDRVRGIMHQNALHSSEERS
IAGWAFAIHYEILKGEISGSTSHSIRALYKRATDSTGAHCPALWKAYVHFELAQLDKERA
RRPSLTSHHMKKKSKWEHRVEEAEQRVKDAFYAGLRNLPWCKEYIMLVFTDAKDVFGDEE
KWKVSRVLLEKELRIYVDLDDEDAWKVAEKEGWVGK
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atggctaccaacgtcccgaagtttgcaagctttcgaccgaagccaaaggcagctcccgaa
ccgccaaaggaacctcaacacgaaaaagttggacaatcatcgaaagagaagagcacagca
ccgcactcgccgacccgtaagggtggggaacaggatgccccagcaaacaaggcttacttc
cgtgatcggcgtggggacctggacatagtacgatatggcacccttaatcgatacgacata
ccgtcttatcgtcgctttggccatggtcgcgtcctaggtatatctactgaccaaaggatt
gaccgcgaattatcaaccgaaaaagcgatttacatcataccagcccaaggcaaacgtcaa
aagcgacttctaacagataagcatgcaagccggtcgaatgagcgtgctctgaaattagtg
aacatcaacaccgataatgataagttgcaacaggatttcatatttctatctacaaaatcc
aagcggaaacgtagcgataccgacgatgaagacgaggctatgccgcaaaccgactatcgg
aacacccaaggaccaaagtctggcgaacctattgatccagatacacggtacgaatcggac
gctgatgttacaatcgatgtggaagtcacccgcaaaaatacaagcctcgtaaggcaaacg
agagaacacccagaggatatttccggctggatagcattaattgcccaccaggaagccatg
ttgaagctcgagcgaccgtctgccgagttgaccgattctgacagagcacatcttgccgat
atacgcattagcacgtatgaggaagccttgaaaaagattggcaaagactacgatggtcga
ctgatgctgtacaccggattgatgaaggaggctgagagagcatgggatggtgccaagcta
gccaataaatggaaagagctgctggagaagtatccacggagcgtgaatctatggatgatg
taccttgactatgtgcaatcaaagtttaccagctacaagtacgaggattgtagggcaatc
ttcttgacatgtatcggggctttgagcgcattggggcacgacgtttctccatcgactatc
ctgcacatactactacgcttcacatccatgacccatgaagcaggatatcaagagcttgct
ctcgcagtctggcaggctttactcgaatatcacttgatgagcccagaagggaatgtttct
acagaatcattcgagtcgttctgggatagtgaagtgccacgtatcggtgaaccaggcgca
agaggatggaaacatcacagcctttcggatgatgctataccgacagatgtttcaccttta
caagaaaaggatccatctgtcagtttcttcgaagatttcacgaaacgcgagacggatgct
actgccaagctgcgtttcccagggcgcgcttctgataatgtagctgaagacgacgctttc
cacaccatattcttcgacgatctaaaaccatacctggaagcagtaccaaagggaacacca
gcggcacttcttatagacgcatttctgtgcttctgtggcttgccaccgttagcgatatct
agcattgagcgcggctggtggtcagatcccttccttcaacgtcattggcaaccgtcttcc
cccagtgctgaggagacaacccagtttacgcaaaccctaagacgctttatggcatgtcca
gcaaatagcttccggatgactactgagctactcttccagcaagatttctcgcttgatggc
atgaatttcagtccagatttcatcagacgtttcttcaacctcctaatttcggagtcaatg
ggaggtggagacatggctggagagtacctacttgcttttgaacgccaacacttctccaag
gaagccttcaagaccgcaaagcgactactgaaagggcagccaatgcactcacgcctatac
aatgcctatgggctggttgaagcaagtctcggaaattcagccaaagctgatcaggtattc
catactgtactcttcatgcagcatgggagtactgcatctctgacctcagagactctggag
ttgttcagcagttgggtctggcaagcactctacagaggggagcagcaggaagcatttgcg
cgaacaacacttacagaagtgagcgagcgcgcattactcgatcaagatcacacaagagca
gttcagagtagcgcactttttgcactgctcgcgtatctgtccaacaattgcaccgccagg
cacgccctcgaagtccaccataatctttcagcatggttcgcgtcacacaagttgttgaac
tccccatccgcagaactgcacgcccaagagattgcgcgcttcctaacccaccacatcact
cacgcgtcgatcgtcaagccgtctctaattcgcacaacgctagaaccgctcatctctcgc
tttccgaacaacaccatcctcctatcactctacgcggcaaacgaagcgcgcttctccatt
gacgacagagtcagaggtatcatgcaccagaacgcgctgcacagctcagaagaaaggagt
atcgctggctgggcctttgcaattcactacgagatcctcaaaggcgagatttccggctcg
acctctcactctatccgcgctctgtataagcgcgctacagattctaccggagcgcattgt
cccgcgctatggaaggcatacgtacactttgaactagcgcaactcgacaaagaacgagct
agacggccaagcctaacctcacaccacatgaaaaagaagagtaaatgggaacatagagtt
gaagaggcagagcaaagagtcaaagatgcattctacgctggcttgaggaacctgccgtgg
tgtaaggagtacatcatgctcgtcttcacagacgcgaaagacgtgtttggggatgaggaa
aagtggaaggtatctagagttttgcttgagaaagagttacggatatatgtagatctggac
gacgaagatgcatggaaggtggctgagaaagaaggctgggtgggcaaataa
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