KEGG   Pyrenophora teres: PTT_11577Help
Entry
PTT_11577         CDS       T01613                                 

Definition
(GenBank) hypothetical protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
pte  Pyrenophora teres
Pathway
pte03030  DNA replication
pte03410  Base excision repair
pte03420  Nucleotide excision repair
pte03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pte00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PTT_11577
   03410 Base excision repair
    PTT_11577
   03420 Nucleotide excision repair
    PTT_11577
   03430 Mismatch repair
    PTT_11577
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pte03032]
    PTT_11577
   03400 DNA repair and recombination proteins [BR:pte03400]
    PTT_11577
Enzymes [BR:pte01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     PTT_11577
    6.5.1.6  DNA ligase (ATP or NAD+)
     PTT_11577
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     PTT_11577
DNA replication proteins [BR:pte03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    PTT_11577
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     PTT_11577
DNA repair and recombination proteins [BR:pte03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     PTT_11577
   NER (nucleotide excision repair)
    Other NER factors
     PTT_11577
   MMR (mismatch excision repair)
    Other MMR factors
     PTT_11577
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Motif
Other DBs
NCBI-ProteinID: EFQ91558
UniProt: E3RRT9
LinkDB All DBs
Position
Unknown
AA seq 873 aa AA seqDB search
MNSPSKRRKKNDGSGKPVRSLDYFFAKQTAKATPKDAPTNTGASAEEDTTGLTDEQLARK
LQEQFDKEDQQRGQDAEPASSNELYTDPGKSMTDVTAKNDVDNVEPSNVPLPNRTIQEAP
ESAPPKQKNTLSLQSTASEEDTITANIPFDQSPLEFDPQDYIPDLQKHWVADGGHATYAL
LTRCFILVNSTTSRIKIVDTLVNLLRTIIESDPSSLLPAVWLATNAISPPYIDLELGLGG
SAISKALKKVCGLDNAGLKVLNNKYGDAGDVAFEAKKKQSFTLRKPKPLTIKSVFESLVK
IANSKGHGSVENKQRIVERLVQDARGAEESRYIVRTLVQHLRIGAVKTTMLIALSRAFML
SKPLGAEFEIRDRKDMAKLKKEELTEIYSRNEEIVKACFARRPNYNDLIPVLLEIGVCEE
LLVRCGLTLHIPLRPMLGSITRDMGEMLTKLQGRDFACEYKYDGQRAQVHCDDKGKVTIF
SRHLEVMTDKYPDLVALVPKIRGEGVSSFILEGEVVAVDRESGDLKTFQTLANRARKDVV
IGAVTIDVCLFAFDLMYLNGEELLNRPFRERRSLLKSLFVEIPHHFTWVKSLDATSADVE
AVQSFFQSALDIKCEGIMVKMLDNNPPIPDLVPDPDQPTTPKKPKKKAAKSSKSSAVKDD
SSTTTTKPSRRKPLLSTYEPDKRLDAWLKVKKDYSTTSETLDLIPIAAFHGSGRKAAWWS
PILLAVRNAETGQLDAVTKCMSGFTDAFYRANRKKYDPDDPECTVVLGQKPSFVRYNGGA
GTPAVWFEPHEVWEVAFADLTLSPTYTAAIGLVSEERGLSTRFPRFLRVREDKGVDEATE
AGELAALYRKQEAKATLTKDEGEQQDIVEEEED
NT seq 2622 nt NT seq  +upstreamnt  +downstreamnt
atgaacagcccatccaagcgacgaaagaagaatgatggctcagggaagccggtacgcagt
ctagactacttcttcgcgaaacaaacggctaaagcgacacccaaagatgcgcccacgaac
acaggcgcgtctgcggaggaagatactacaggattgacagatgagcaacttgcgcggaaa
cttcaggagcaattcgataaggaagaccagcagcgtgggcaagatgcggagccggcaagc
tcaaatgagctttacactgatccgggcaagtctatgacggatgtcaccgcgaagaatgat
gtcgacaatgtggaaccctccaatgtgcccttgccgaaccgcactatacaagaagccccg
gaatctgcacccccaaagcagaaaaacaccctttcacttcagtcgaccgcttccgaagaa
gacaccataactgcaaacatacctttcgaccaaagcccgctcgagttcgaccctcaagac
tatataccagacctacaaaagcactgggtggcggatggaggtcacgcaacgtacgcgctt
ctaacccgatgctttatcctggtcaacagcacaacaagtcgaatcaagattgtggatact
ctggtaaatctcctacgaacgattatcgagagcgatcccagtagcttgctccccgccgtc
tggcttgcgacaaatgcgatatctcccccgtacatcgacttggagttggggttaggagga
tcggcaatctcaaaggctttgaagaaggtgtgcgggctggacaatgcgggattgaaagtg
ctgaataataaatacggagacgcgggggatgtggcgtttgaggcgaagaagaagcagtcg
tttacgctgcggaaaccgaaacctctgactatcaagagcgtctttgagtcgttggtaaag
attgcgaatagcaagggacatggcagtgtggagaacaaacaacgaatagtagaaaggctg
gtacaagatgcaaggggtgcagaagagagtcggtacattgtacgaacgctcgtgcagcat
ctccgtatcggcgcggtcaaaaccaccatgctcattgcattgtcgcgagctttcatgctc
tcgaaaccgctgggcgccgaattcgaaatccgcgatcgaaaagacatggcaaagctcaag
aaagaggaattgacggaaatctacagcaggaacgaggagattgtaaaggcgtgttttgct
cgacggccaaactacaatgatctgatacccgtacttttggagattggcgtgtgtgaagag
ttactcgtacgctgtgggctgacacttcacatcccactaaggcccatgttgggtagcatt
acgcgcgacatgggcgagatgctcaccaagctgcaaggccgagactttgcgtgcgaatac
aagtacgatgggcaaagagcgcaggttcactgcgacgacaagggcaaagtgacaatcttc
tcgcgacatctagaagtcatgacagacaagtatcctgacctggtagctctggtacccaag
atacgaggcgaaggcgtgtcgagcttcatcctcgaaggcgaagtggtagccgtcgaccgt
gagagcggagacctcaagacattccaaacactagccaaccgggcaaggaaagacgtcgta
ataggcgctgtgacaatcgatgtctgtctctttgcattcgacctcatgtacctcaacggc
gaggagctactgaaccgacccttcagagagcgacgatcactcctcaagagcctctttgtc
gagatcccccaccacttcacctgggtcaagagcctagacgccacatccgccgacgtcgaa
gccgtgcaatcttttttccaatccgccctcgacatcaaatgcgaaggcatcatggtcaag
atgctcgacaacaaccccccaatcccagacctcgtccccgaccccgaccaacccaccacc
cccaaaaaacccaagaagaaagccgcaaaatcctcaaaatcttccgccgtcaaagacgac
tcctccaccaccactacaaaaccctcccgccgcaaacccctcctctcaacctacgaacca
gacaaacgcctcgacgcctggctcaaagtaaaaaaagactactccaccacatccgaaacc
ctcgacctaatccccattgccgctttccacggctcaggccgaaaagccgcatggtggtcc
cccatcctgctcgctgtccgcaacgccgaaacgggccaactagacgccgtcacaaaatgc
atgtcgggcttcacagatgcgttttacagggccaaccgcaaaaagtacgacccggatgat
ccggagtgcacggtcgtcttgggccagaagcccagttttgtgcgttataatggtggggcg
gggacgccggccgtgtggtttgagccgcacgaggtgtgggaggttgcgtttgcggatttg
acgctgagtccgacgtatacggcggcgattgggctggtgagtgaggagagggggttgagt
actagatttccgcgctttctgagggtgagggaggacaagggggttgacgaggcgactgag
gcgggcgagttggcggccctgtataggaagcaggaggccaaggcgaccctgacgaaagac
gaaggagaacaacaagacattgtagaggaagaagaggattaa

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