Parasteatoda tepidariorum (common house spider): 107439380
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Entry
107439380 CDS
T06106
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB isoform X1
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Pathway
ptep03022
Basal transcription factors
ptep03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107439380
09124 Replication and repair
03420 Nucleotide excision repair
107439380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptep03021
]
107439380
03400 DNA repair and recombination proteins [BR:
ptep03400
]
107439380
Enzymes [BR:
ptep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
107439380
Transcription machinery [BR:
ptep03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
107439380
DNA repair and recombination proteins [BR:
ptep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
107439380
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
Terminase_5
Motif
Other DBs
NCBI-GeneID:
107439380
NCBI-ProteinID:
XP_015907440
LinkDB
All DBs
Position
Unknown
AA seq
776 aa
AA seq
DB search
MGKTNKDWKKGKKKFYKKGFDDDYAEEETEADVIPAAASQQITSETPEDEFGAKDYRKIM
ELRMDHASRPLWVAPDGHIFLEAFSPVYKHAHDFLIAISEPVCRPEHIHEYRLTAYSLYA
AVSVGLQTNDIIEYLRRLSKTSIPDGIVEFIKLCTVSYGKIKLLLKHNRYFIESQFPEVL
QKLLKDHVIQECRLKRDENDDSAITNVDGVAKTGQGSNGTNGAIPGKSTDATIEKNESVP
DDIFNFYEKLEREEEDKEDFQTVSVEINQEKIEILQKRCIELEYPLLAEYDFKNDSVNPD
INMDLRPMAILRPYQEKSLRKMFGNGRARSGIIVLPCGAGKSLVGVTACCTVRKRCLVLC
NSGVSVEQWKTQFKMWSTADDSMICRFTSDAKDKPMGCGICVTTYSMITHTQKRSWEAEQ
VMNWLKEQEWGLMLLDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIQDLNFLIG
PKLYEANWLELQNNGYIAKVQCAEVWCPMSPEFYREYLIAKAAKKLLLFVMNPNKFRSCQ
FLIRYHEIRSDKVIVFSDNVFALKHYAIKMNRPYIYGPTSQAERMQILQNFKYNPKVNTI
FVSKVADTSFDLPEANVLIQISSHGGSRRQEAQRLGRILRAKKGAYAEEYNAFFYTLVSQ
DTMEMHYSRKRQRFLVNQGYSYKVITKLMGMDEQEELAYKTREEQTQLLQQVLAANDADA
EDEKVPSEFLGGKASQQVSRRVGSMSSLSGADDAVYMEYKLRREGSKHPLFKRFRK
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaactaacaaagattggaagaaagggaagaaaaagttttacaaaaaaggcttt
gatgacgattatgctgaagaagaaactgaagctgatgtcatacctgcggctgctagtcaa
cagattacttcagaaacaccagaagatgaatttggtgccaaggattacagaaaaattatg
gaactacgaatggaccatgcttctcgtcctttatgggtggcacctgatggccatattttt
cttgaagcattttcaccagtgtacaagcatgctcacgatttcctaattgctatatcagag
cctgtttgtcgtcctgaacatattcatgaataccgtctcactgcatattctttatatgct
gctgtgtctgttggtttacaaacaaatgacattattgaatatttaagaagacttagtaaa
accagcatacctgatggcattgtagaatttataaagctttgtactgttagttatggaaag
ataaaactgttattgaagcataatagatattttatagaaagccaatttcctgaagttttg
caaaagctactcaaggatcatgttatccaggagtgtcgattgaagcgagatgaaaatgat
gatagcgcaattacaaacgttgatggagtagccaaaactggacaagggtcaaatggaact
aatggggctattcctggtaaaagcacagatgccactattgaaaaaaatgagagtgttcct
gatgatatatttaatttctatgaaaagcttgagcgtgaagaggaagataaggaagatttc
caaacagtttctgtagaaattaatcaagaaaaaattgaaatccttcaaaaacggtgtatt
gagcttgaatatcctttgctggcagaatatgacttcaaaaatgattctgttaatcctgat
atcaatatggatttgagacccatggctatattaagaccttaccaagagaaaagtttaaga
aaaatgtttggaaatggtcgtgcaagatctggaattattgtgttaccttgtggtgccgga
aaatctttagttggtgtcactgcttgctgcactgtcagaaaaagatgtcttgtactctgc
aattctggtgtgtcagtagaacaatggaaaactcaatttaaaatgtggtccacagctgat
gatagtatgatttgtcgttttacatctgatgcaaaagataagccgatgggatgtggtatt
tgcgttacaacatattctatgattacacatactcaaaaaagatcttgggaggcagaacag
gtgatgaattggcttaaagaacaagaatggggtttaatgcttttagatgaggtgcacact
atacctgcaaaaatgttcagaagagttctgactattgttcaagcgcattgcaaacttgga
ctgactgctacactagttagggaagatgacaaaattcaagatttaaattttttgattggt
cctaagttgtatgaggctaactggcttgaattacaaaataatggttatattgccaaagtt
caatgtgctgaggtatggtgtccaatgtctccagagttttatagggaatatttgattgct
aaggcagctaaaaaattactcctctttgtaatgaatccaaataaatttagatcttgccag
ttccttattaggtatcatgaaataagaagtgataaagttattgtattctctgataatgtg
tttgccctgaagcattatgctataaaaatgaacagaccttatatttatgggccaacatct
caagccgagagaatgcaaattctacaaaacttcaagtacaatcctaaagtgaacacaatc
tttgtatctaaagtagctgatacatcttttgatttaccagaagctaatgttcttatccaa
atatcaagtcatggtggttccaggaggcaagaagctcagagattgggaagaattttgaga
gcaaaaaaaggtgcttatgctgaagaatacaatgcctttttctacaccttagtatcccaa
gatactatggaaatgcattattctaggaagcgacagagatttttggtgaatcaaggctat
agctacaaagttatcactaaattaatgggaatggatgagcaagaagaattagcttataaa
acaagagaagaacaaactcagcttttacagcaggtattagctgccaatgatgctgatgct
gaagatgaaaaagttccttctgaatttttaggtggcaaagcatctcaacaggtttctcgt
cgtgttggtagtatgagttcattgtctggtgctgatgatgctgtttacatggaatataaa
cttagaagagaaggcagcaaacatcctcttttcaaaagattcagaaaatga
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integrated database retrieval system
