Parasteatoda tepidariorum (common house spider): 107455549
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Entry
107455549 CDS
T06106
Name
(RefSeq) E3 ubiquitin-protein ligase parkin isoform X1
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Pathway
ptep04120
Ubiquitin mediated proteolysis
ptep04137
Mitophagy - animal
ptep04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107455549
04120 Ubiquitin mediated proteolysis
107455549
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
107455549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptep04131
]
107455549
04121 Ubiquitin system [BR:
ptep04121
]
107455549
03029 Mitochondrial biogenesis [BR:
ptep03029
]
107455549
Enzymes [BR:
ptep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
107455549
Membrane trafficking [BR:
ptep04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
107455549
Aggrephagy
Other aggrephagy associated proteins
107455549
Xenophagy
Other xenophagy associated proteins
107455549
Ubiquitin system [BR:
ptep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
107455549
Mitochondrial biogenesis [BR:
ptep03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
107455549
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
ubiquitin
Rad60-SLD
IBR
Dsc3_N
Rad60-SLD_2
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
107455549
NCBI-ProteinID:
XP_015928640
LinkDB
All DBs
Position
Unknown
AA seq
456 aa
AA seq
DB search
MNFYEIVIGFIRSIMNIFISQRVIDTQKNYLKIFVKCGADTMVPVNVENNWTVGDLKANV
ASKLCLKAEDIRIIFSGKELHDDVEFQDCDVGEQSIIHAVPHTKKLMDISVENKCPLNQT
PFCSDDFTEDKKTSPKSHFYVYCNDPCKSMHPGKLRVRCSSCKEGTLIVNQDPTCWEDVL
VPGKINGVCQYEKCEGTHAEFYFKCTSHVSIPHDQAVPLYLIKNNFKSVPCIACTDTREI
VLVFPCTSGHVICVDCFRLYCLSRLGERRFIQDSTIGYSIDCPAGCSDSLIKEPHHFKLL
GEEEYSRYQRFGAEECLLQDGGVLCPQPNCGAGILPDTHCTRVVCSQNAGGCGFVFCKEC
MQGYHVGPCEPPEGISVSDRINYTIIDERASSSKWDEDSKKTIKVTTKPCPKCRTPTERD
GGCMHMVCTRSQCGYHWCWVCQTEWTRECMGNHWFG
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaatttctatgaaatagtgatcggttttattaggtcaataatgaatatatttatcagc
caaagagtgattgacactcaaaaaaattacctaaaaatattcgtaaaatgtggagctgat
acgatggtccctgttaatgtggaaaataattggactgtgggtgatttaaaagcaaatgta
gcatctaaattatgtctgaaagctgaggatattaggataatattttcgggcaaagaactt
catgatgatgtcgaatttcaggactgtgatgttggtgaacaaagtatcattcatgctgtt
ccacacaccaaaaaattaatggatatatcagtagaaaataaatgcccattgaatcaaact
ccattttgttctgatgattttacagaagataagaaaacatctccaaagagccacttttat
gtttattgcaatgatccatgcaaaagcatgcacccgggaaaattgagagtaaggtgctct
tcttgtaaagaaggaactctaattgttaatcaggatccaacttgttgggaagatgtatta
gttccaggtaaaattaacggtgtgtgtcaatatgaaaagtgtgaaggtacacatgcagag
ttttatttcaaatgtacaagccatgtttcgatacctcacgatcaagctgttcctttatat
ctcataaaaaacaacttcaaaagtgttccatgtattgcctgtacagataccagggaaatt
gtattagtatttccttgcactagtggccatgtaatttgtgtggattgttttcggctttat
tgtttatcacgtttgggtgaaaggagatttattcaagattctactattggatattctatt
gattgcccagctggctgttcagattcattgattaaagaaccacatcatttcaaattgctt
ggagaagaagaatactccagatatcaaagatttggtgctgaagaatgccttctgcaagat
ggtggagtgctctgtcctcagccaaattgtggtgctggtattttaccggacactcactgt
acacgagttgtttgctctcaaaatgcaggaggatgtggatttgtattttgtaaagaatgt
atgcaaggttatcatgttgggccttgtgaacctcctgaaggaatttcagtcagtgatagg
ataaactatacaataatagacgagagagcgtctagctcaaagtgggatgaagacagtaag
aaaacaattaaggtcactacaaagccatgtccaaaatgtcgcactcccactgaaagagat
ggtggctgtatgcatatggtttgtacacgatctcaatgcggatatcattggtgttgggtt
tgccaaacagaatggactcgtgaatgtatgggcaatcattggtttggttaa
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