KEGG   Panthera tigris altaica (Amur tiger): 102950287Help
Entry
102950287         CDS       T02988                                 

Gene name
HDAC6
Definition
(RefSeq) histone deacetylase 6
  KO
K11407  histone deacetylase 6 [EC:3.5.1.98]
Organism
ptg  Panthera tigris altaica (Amur tiger)
Pathway
ptg05034  Alcoholism
ptg05165  Human papillomavirus infection
ptg05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:ptg00001]
 09160 Human Diseases
  09161 Cancers
   05203 Viral carcinogenesis
    102950287 (HDAC6)
  09164 Substance dependence
   05034 Alcoholism
    102950287 (HDAC6)
  09167 Infectious diseases
   05165 Human papillomavirus infection
    102950287 (HDAC6)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatase and associated proteins [BR:ptg01009]
    102950287 (HDAC6)
  09182 Protein families: genetic information processing
   03019 Messenger RNA Biogenesis [BR:ptg03019]
    102950287 (HDAC6)
   04131 Membrane trafficking [BR:ptg04131]
    102950287 (HDAC6)
   03036 Chromosome and associated proteins [BR:ptg03036]
    102950287 (HDAC6)
Enzymes [BR:ptg01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     102950287 (HDAC6)
Protein phosphatases and associated proteins [BR:ptg01009]
 Protein Ser/ Thr phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     102950287 (HDAC6)
Messenger RNA biogenesis [BR:ptg03019]
 Eukaryotic Type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     102950287 (HDAC6)
Membrane trafficking [BR:ptg04131]
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    102950287 (HDAC6)
Chromosome and associated proteins [BR:ptg03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     102950287 (HDAC6)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Hist_deacetyl zf-UBP
Motif
Other DBs
NCBI-GeneID: 102950287
NCBI-ProteinID: XP_015394293
LinkDB All DBs
Position
Un
AA seq 1073 aa AA seqDB search
MTSTGQDSTSTRQRRSRHNPHSPPHDSSVTSKRGVKKGAILSSSPSLAEVKKKGRMKKLS
QAAEQDLIMDLRRLDLNLEAKTLSGTGLVFDEQLNEFHCLWDDSFPESPERLHAIKEQLI
QEGLLDRCVSFQARFAEKDELMLVHSLEYIDLMETTQYMNERELRILADTYDSVYLHPNS
YTCACLASGSVLRLVDAVLGKEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQ
KHDIQRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTIGFGHG
QGYTINVPWNQVGMRDADYIAAFLHLLLPVALEFQPQLVLVAAGFDALQGDPKGEMATTP
AGFAQLTHLLMGLAEGKLILSLEGGYNLRSLAEGVSASLHTLLGDPCPILESPGAPCPSA
LVSLCCALEALEPFWEVLVRSVETPEEDILEEDSAEEKDEEGLWRPPALPILTWPMLQAR
TGLVYDQRMMGHHNLWDNHHPEMPQRVLRIMQRLEELGLAGRCLMLPARPAMEVLNGTAV
VRPPGHHAERDAACGFCFFNSVAVAARHAQAISGQALRILIVDWDVHHGNGTQHIFEEDP
SVLYISLHRYDHGTFFPMGEEGASSQIGRAAGTGFTVNVAWNGPRVGDADYLAAWHRLVL
PIAYEFNPELVLVSAGFDAAWGDPLGGCQVSPEGYAHLTHLLMGLANGRIILILEGGYNL
TSISESMAACTRSLLGDPPPLLTLSRPPLSGALASITETIQVHRRYWRSLRVMKVEDKEE
EPSLSKSVTNPGSAKRMTTPERNILDAGTEKAVSASSVEESTLGQPKSETAMVELSQDQS
LEAPTQKAMLDQTTSQAATVEATAGQTTSEEAVGGAEMIQTPPALCTDNQTPTASPEQGA
TSQISPSELIENLRTLELNCKAQEAPESQIPEEDKLLGEAAGGQDMLIQSFGVHANTDQA
IFYAVTPLPWCPHLVAVCPIPESGLDVTQPCQDCGTLQENWVCLSCYQVYCGRYVSAHML
QHHEGSGHPLVLSYVDLSTWCYSCEAYVHHQSLLEVKNIAHQKKFGEDMPHSH
NT seq 3222 nt NT seq  +upstreamnt  +downstreamnt
atgacctccacgggccaggattccacctcaaccaggcagcgaaggagtaggcataacccc
cattcgcccccccacgactccagcgtcacctcgaagcgaggtgttaagaagggtgccata
ctctcctccagccctagtctagcagaggtaaagaagaaaggcagaatgaagaagctcagc
caagcagcagagcaagacctaatcatggacctgcgaaggctggatctgaaccttgaggcc
aagacactgtctggcactggtttggtgttcgatgagcagctaaatgaattccactgcctc
tgggatgacagcttccctgaaagccctgaacgactccatgccatcaaggaacagctgatc
caggagggcctcctggaccgctgtgtgtcctttcaggctcgatttgctgaaaaggatgag
ctgatgttggttcacagcctagaatacattgatctgatggagacgacccagtacatgaat
gagagagagctccgcatcctagcagacacctatgactcagtttatctgcatccgaactcc
tatacctgtgcctgcctggcctcaggctctgtcctcaggctggtggatgctgtcctgggg
aaggagatacggaatggcatggccatcatcaggcctcctggacaccacgcccagcacagt
cttatggatgggtattgcatgttcaaccacgtggccgtggctgcccgctacgctcaacag
aagcatgacattcagagggtccttatcgtggattgggatgttcaccacggtcaaggaacc
cagttcacctttgaccaggaccccagcgtcctctatttctccatccaccgttatgagcag
ggtcggttctggccccaccttaaggcctctaactggtccaccataggttttggtcatggc
cagggatataccatcaatgtgccttggaaccaggtggggatgcgagatgccgactatatt
gccgctttcctgcacctccttctgccggtcgcccttgagttccagccccagctggtcctg
gtggccgctggatttgatgcccttcaaggggaccccaagggcgagatggccaccactcca
gcagggttcgctcagctaacccacttgctcatgggtctggcagaaggcaaactgatcctg
tctctggagggtggctacaaccttcgttccttggctgagggcgtcagtgcctcactccac
acccttctgggagacccttgccccatactggagtcccctggcgccccctgcccaagtgcc
ctggtgtcactgtgctgcgctctggaagccctggagcccttctgggaggtccttgtaaga
tcagttgagaccccggaggaggacatcctggaggaagatagcgcagaggagaaggatgaa
gagggactgtggcggcccccagcgctcccaatcctgacgtggcccatgctacaggctcgc
acagggctggtctatgaccagcggatgatgggtcaccacaacttgtgggacaaccaccac
ccagagatgcctcagcgagtcttacgaatcatgcagcgtttggaggagctgggccttgcg
gggcgctgcctcatgctgcctgcacgtcccgccatggaagttttgaatggtaccgctgtg
gtgcgtcccccaggacaccatgctgagcgggatgccgcttgtggtttctgcttttttaat
tctgtggctgtggctgctcgccatgcccaggccatcagtgggcaggcgctgcggatcctg
atagtggactgggacgtgcatcatggtaatggaactcagcacatatttgaggaggacccc
agcgtactgtacatttccctgcaccggtatgaccatggcaccttctttcccatgggggag
gagggtgccagcagccagataggccgggccgcaggcactggcttcactgtcaacgtggcc
tggaatggaccccgtgtgggtgacgccgactacctggctgcatggcatcgcctggtgctt
cctattgcctacgagtttaacccagagctggtgctggtctcagcgggctttgacgccgca
tggggggacccactggggggctgccaggtgtcgcctgagggctatgcccacctcacccac
ctgctgatgggccttgccaatggccgcattatcctaatcctagagggtggctataacctg
acatccatctcggagtccatggctgcctgtacccgctccctccttggggacccaccccca
ctgctgaccttgtcgcggcccccactatcaggggccctggcctcaatcaccgagaccatc
caagtccatcgcagatactggcgcagcttacgggtcatgaaggtggaagacaaggaggag
gaaccctccctttctaagtcagtcaccaaccctgggtcagctaagaggatgaccacacca
gaaaggaacattctggatgcaggcacagagaaggctgtctcagcatcatctgtggaagag
tccactctaggccaacctaagtcagagactgctatggtggagctcagtcaggaccagtcc
ttggaggctcccacacagaaagccatgctggaccagaccacctcacaggcagccacagtg
gaggccacagcaggccagaccacctcagaggaggctgttgggggagctgagatgatccaa
acccctccagctttatgtactgacaaccagactcccacagcctcacctgagcaaggtgcc
acatcccaaatatcccccagtgagctgattgagaatctcaggaccttggaactaaactgc
aaggctcaggaggcaccagaatctcagatcccagaagaggataagctactgggagaggca
gctggaggtcaggacatgctgattcagagctttggggtccatgctaacactgaccaggcc
atcttttatgctgtgacacctctgccctggtgtccccatttggtggcagtatgtcccata
cctgaatcaggcctggacgtgacccaaccttgtcaggactgtggaacactccaggagaac
tgggtgtgtctgtcttgctatcaggtctactgtggtcgttatgtcagtgcccatatgctg
caacaccacgaagggtcaggacacccgctggtcctcagctacgtcgatctgtctacctgg
tgttacagctgtgaggcctatgtccaccaccagtctctcctagaagtgaagaacatcgcc
caccagaaaaagtttggggaggacatgccccactcacactga

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