KEGG   Panthera tigris altaica (Amur tiger): 102950287Help
Entry
102950287         CDS       T02988                                 

Gene name
HDAC6
Definition
(RefSeq) histone deacetylase 6
  KO
K11407  histone deacetylase 6 [EC:3.5.1.98]
Organism
ptg  Panthera tigris altaica (Amur tiger)
Pathway
ptg05034  Alcoholism
ptg05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:ptg00001]
 09160 Human Diseases
  09161 Cancers: Overview
   05203 Viral carcinogenesis
    102950287 (HDAC6)
  09165 Substance dependence
   05034 Alcoholism
    102950287 (HDAC6)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ptg01009]
    102950287 (HDAC6)
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptg03019]
    102950287 (HDAC6)
   04131 Membrane trafficking [BR:ptg04131]
    102950287 (HDAC6)
   03036 Chromosome and associated proteins [BR:ptg03036]
    102950287 (HDAC6)
Enzymes [BR:ptg01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     102950287 (HDAC6)
Protein phosphatases and associated proteins [BR:ptg01009]
 Protein Ser/ Thr phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     102950287 (HDAC6)
Messenger RNA biogenesis [BR:ptg03019]
 Eukaryotic Type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     102950287 (HDAC6)
Membrane trafficking [BR:ptg04131]
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    102950287 (HDAC6)
Chromosome and associated proteins [BR:ptg03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     102950287 (HDAC6)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Hist_deacetyl zf-UBP zf-UBP_var
Motif
Other DBs
NCBI-GeneID: 102950287
NCBI-ProteinID: XP_015394293
LinkDB All DBs
Position
Un
AA seq 1073 aa AA seqDB search
MTSTGQDSTSTRQRRSRHNPHSPPHDSSVTSKRGVKKGAILSSSPSLAEVKKKGRMKKLS
QAAEQDLIMDLRRLDLNLEAKTLSGTGLVFDEQLNEFHCLWDDSFPESPERLHAIKEQLI
QEGLLDRCVSFQARFAEKDELMLVHSLEYIDLMETTQYMNERELRILADTYDSVYLHPNS
YTCACLASGSVLRLVDAVLGKEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQ
KHDIQRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTIGFGHG
QGYTINVPWNQVGMRDADYIAAFLHLLLPVALEFQPQLVLVAAGFDALQGDPKGEMATTP
AGFAQLTHLLMGLAEGKLILSLEGGYNLRSLAEGVSASLHTLLGDPCPILESPGAPCPSA
LVSLCCALEALEPFWEVLVRSVETPEEDILEEDSAEEKDEEGLWRPPALPILTWPMLQAR
TGLVYDQRMMGHHNLWDNHHPEMPQRVLRIMQRLEELGLAGRCLMLPARPAMEVLNGTAV
VRPPGHHAERDAACGFCFFNSVAVAARHAQAISGQALRILIVDWDVHHGNGTQHIFEEDP
SVLYISLHRYDHGTFFPMGEEGASSQIGRAAGTGFTVNVAWNGPRVGDADYLAAWHRLVL
PIAYEFNPELVLVSAGFDAAWGDPLGGCQVSPEGYAHLTHLLMGLANGRIILILEGGYNL
TSISESMAACTRSLLGDPPPLLTLSRPPLSGALASITETIQVHRRYWRSLRVMKVEDKEE
EPSLSKSVTNPGSAKRMTTPERNILDAGTEKAVSASSVEESTLGQPKSETAMVELSQDQS
LEAPTQKAMLDQTTSQAATVEATAGQTTSEEAVGGAEMIQTPPALCTDNQTPTASPEQGA
TSQISPSELIENLRTLELNCKAQEAPESQIPEEDKLLGEAAGGQDMLIQSFGVHANTDQA
IFYAVTPLPWCPHLVAVCPIPESGLDVTQPCQDCGTLQENWVCLSCYQVYCGRYVSAHML
QHHEGSGHPLVLSYVDLSTWCYSCEAYVHHQSLLEVKNIAHQKKFGEDMPHSH
NT seq 3222 nt NT seq  +upstreamnt  +downstreamnt
atgacctccacgggccaggattccacctcaaccaggcagcgaaggagtaggcataacccc
cattcgcccccccacgactccagcgtcacctcgaagcgaggtgttaagaagggtgccata
ctctcctccagccctagtctagcagaggtaaagaagaaaggcagaatgaagaagctcagc
caagcagcagagcaagacctaatcatggacctgcgaaggctggatctgaaccttgaggcc
aagacactgtctggcactggtttggtgttcgatgagcagctaaatgaattccactgcctc
tgggatgacagcttccctgaaagccctgaacgactccatgccatcaaggaacagctgatc
caggagggcctcctggaccgctgtgtgtcctttcaggctcgatttgctgaaaaggatgag
ctgatgttggttcacagcctagaatacattgatctgatggagacgacccagtacatgaat
gagagagagctccgcatcctagcagacacctatgactcagtttatctgcatccgaactcc
tatacctgtgcctgcctggcctcaggctctgtcctcaggctggtggatgctgtcctgggg
aaggagatacggaatggcatggccatcatcaggcctcctggacaccacgcccagcacagt
cttatggatgggtattgcatgttcaaccacgtggccgtggctgcccgctacgctcaacag
aagcatgacattcagagggtccttatcgtggattgggatgttcaccacggtcaaggaacc
cagttcacctttgaccaggaccccagcgtcctctatttctccatccaccgttatgagcag
ggtcggttctggccccaccttaaggcctctaactggtccaccataggttttggtcatggc
cagggatataccatcaatgtgccttggaaccaggtggggatgcgagatgccgactatatt
gccgctttcctgcacctccttctgccggtcgcccttgagttccagccccagctggtcctg
gtggccgctggatttgatgcccttcaaggggaccccaagggcgagatggccaccactcca
gcagggttcgctcagctaacccacttgctcatgggtctggcagaaggcaaactgatcctg
tctctggagggtggctacaaccttcgttccttggctgagggcgtcagtgcctcactccac
acccttctgggagacccttgccccatactggagtcccctggcgccccctgcccaagtgcc
ctggtgtcactgtgctgcgctctggaagccctggagcccttctgggaggtccttgtaaga
tcagttgagaccccggaggaggacatcctggaggaagatagcgcagaggagaaggatgaa
gagggactgtggcggcccccagcgctcccaatcctgacgtggcccatgctacaggctcgc
acagggctggtctatgaccagcggatgatgggtcaccacaacttgtgggacaaccaccac
ccagagatgcctcagcgagtcttacgaatcatgcagcgtttggaggagctgggccttgcg
gggcgctgcctcatgctgcctgcacgtcccgccatggaagttttgaatggtaccgctgtg
gtgcgtcccccaggacaccatgctgagcgggatgccgcttgtggtttctgcttttttaat
tctgtggctgtggctgctcgccatgcccaggccatcagtgggcaggcgctgcggatcctg
atagtggactgggacgtgcatcatggtaatggaactcagcacatatttgaggaggacccc
agcgtactgtacatttccctgcaccggtatgaccatggcaccttctttcccatgggggag
gagggtgccagcagccagataggccgggccgcaggcactggcttcactgtcaacgtggcc
tggaatggaccccgtgtgggtgacgccgactacctggctgcatggcatcgcctggtgctt
cctattgcctacgagtttaacccagagctggtgctggtctcagcgggctttgacgccgca
tggggggacccactggggggctgccaggtgtcgcctgagggctatgcccacctcacccac
ctgctgatgggccttgccaatggccgcattatcctaatcctagagggtggctataacctg
acatccatctcggagtccatggctgcctgtacccgctccctccttggggacccaccccca
ctgctgaccttgtcgcggcccccactatcaggggccctggcctcaatcaccgagaccatc
caagtccatcgcagatactggcgcagcttacgggtcatgaaggtggaagacaaggaggag
gaaccctccctttctaagtcagtcaccaaccctgggtcagctaagaggatgaccacacca
gaaaggaacattctggatgcaggcacagagaaggctgtctcagcatcatctgtggaagag
tccactctaggccaacctaagtcagagactgctatggtggagctcagtcaggaccagtcc
ttggaggctcccacacagaaagccatgctggaccagaccacctcacaggcagccacagtg
gaggccacagcaggccagaccacctcagaggaggctgttgggggagctgagatgatccaa
acccctccagctttatgtactgacaaccagactcccacagcctcacctgagcaaggtgcc
acatcccaaatatcccccagtgagctgattgagaatctcaggaccttggaactaaactgc
aaggctcaggaggcaccagaatctcagatcccagaagaggataagctactgggagaggca
gctggaggtcaggacatgctgattcagagctttggggtccatgctaacactgaccaggcc
atcttttatgctgtgacacctctgccctggtgtccccatttggtggcagtatgtcccata
cctgaatcaggcctggacgtgacccaaccttgtcaggactgtggaacactccaggagaac
tgggtgtgtctgtcttgctatcaggtctactgtggtcgttatgtcagtgcccatatgctg
caacaccacgaagggtcaggacacccgctggtcctcagctacgtcgatctgtctacctgg
tgttacagctgtgaggcctatgtccaccaccagtctctcctagaagtgaagaacatcgcc
caccagaaaaagtttggggaggacatgccccactcacactga

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