Panthera tigris altaica (Amur tiger): 102950877 Help Entry 102950877         CDS       T02988                                  Gene name MSH3 Definition (RefSeq) mutS homolog 3   KO K08736   DNA mismatch repair protein MSH3 Organism ptg  Panthera tigris altaica (Amur tiger) Pathway ptg01524   Platinum drug resistance ptg03430   Mismatch repair ptg05200   Pathways in cancer ptg05210   Colorectal cancer Brite KEGG Orthology (KO) [BR:ptg00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     102950877 (MSH3)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     102950877 (MSH3)   09162 Cancer: specific types    05210 Colorectal cancer     102950877 (MSH3)   09176 Drug resistance: antineoplastic    01524 Platinum drug resistance     102950877 (MSH3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:ptg03400]     102950877 (MSH3) DNA repair and recombination proteins [BR:ptg03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      102950877 (MSH3) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  MutS_V MutS_III MutS_I MutS_II MutS_IV Motif Other DBs NCBI-GeneID:  102950877 NCBI-ProteinID:  XP_007079857 LinkDB All DBs Position Un AA seq 1126 aa AA seqDB search MSGRKPASSRAAAAGPAPARQEVLSRFFQSTGNLKSTTSPTGAVPKAGPDSDSAAPLAST LPPQLPPHVVVEIGRSKKRPLENDGPVQKKAKKVQEKEGRSDSVTSGNVEPKKCLRMKTV LKSLEKLKEFCCDSALPQNRVQTEPPQERYAVLPKCTDFDDISRLRAKNAVSSEDSKSQI SQKDKTLFDLSPSGSSQKGNDNLQTTSDPKPSNKRTKSIYTPLELQYIELKQQQKDAILC VECGYKYRFFGEDAEVAARELNIYCHLDHNFMTASIPTHRLFVHVRRLVAKGYKVGVVKQ TETAALKAIGDNKSSLFSRKLTALYTKSTLIGEDVNPLVKLDDAINVDEIVTDNSTNFLL CICEDQENVKDKKKGNIFIGMVGVQPATGEVVFDSFQDSASRLELETRILCLQPVELLLP SHLSEQTEMLIHRATAARVRDDRIRVERMDNVYFEYSHAFQAVTEFYAKDVVDIQGSQSF SGIINLEKTVICSLAAIIRYLKEFNLEKVLSKPKNFKQLSGEMEFMTINGTTLRNLEILQ NQTDMKTKGSLLWVLDHTKTSFGKRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFG QIENHLRKLPDIERGLCSIYHKKCSTQEFFLIVKTLYHLKSEFQALIPAVNSHVRSDLLQ TFILEIPELLSPVERFLKLLNEQAAKSGDKTELFKDLSDFPLIKKRKDEIQEVTHRIQIH LQDIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFHSPFIVENY RRLNQLREQLVLDCSAEWLDFLEDFSEHYHSLCKAVHHLATVDCIFSLAKVAKQGNYCRP TLQEERKIMIKNGRHPVIDVLLGEQDQYVPNSTNLSGDSERVMIITGPNMGGKSSYIKQV ALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGQSTFMEELTDTAEIIRQATSQ SLVILDELGRGTSTHDGIAIAYATLEHFIKDVKSLTLFVTHYPPVCELEKSYLQQVGNYH MGFLVNEDESKEDPGEEQVPDFVTFLYQITRGIAARSYGLNVAKLADVPEEILKKAASKS KELEGLVNMKRKRLKCFAKLWVINDAKGLQKWRDEFDVEEISGFSS NT seq 3381 nt NT seq  +upstreamnt  +downstreamnt atgtcgggtcggaagcctgcctctagtcgcgccgctgccgccggcccagcccctgcaagg caagaggttttgagcagattcttccagtctacgggaaacctgaaatccactacgtccccc acgggtgcagtcccgaaggccggccctgactctgattccgcagcgcccctagcgtccact ctcccgcctcagttgccgccacacgtggttgtggaaatcggcagaagtaaaaagagacca ctggagaatgatgggcctgttcaaaagaaggcaaagaaagtccaagaaaaggaaggaagg agtgattcagtaacgtctgggaatgttgagccaaagaaatgtctgaggatgaagactgtt ttaaagtctctggaaaaattgaaagaattctgctgcgattctgcccttcctcaaaataga gtccagacagagcctcctcaggagagatacgcagttctgccaaaatgtactgattttgac gatatcagtcgtctccgtgcaaagaatgcagtttcttctgaagattccaaatctcaaatt agtcaaaaggacaagacacttttcgatctcagtccttctggatcttcacaaaagggtaat gacaatttacagacaacttctgatcctaaaccatctaacaaacggaccaaaagcatctac acacctttagaattacagtacattgaattgaagcagcagcagaaagatgcaattttgtgt gtggaatgtggatataagtatagattctttggggaagatgcagaggttgcagcccgggag ctcaatatttattgccatttagatcacaactttatgacagcaagcatacctactcacaga ctgtttgttcatgtacgccgcctcgtggccaagggatataaggtgggagtcgtgaagcag actgaaactgcggcattaaaggccattggggataacaaaagttcacttttttcccggaaa ttgactgctctttatacaaaatctacacttattggagaagatgtgaatcctttagtcaag ctggatgatgctataaatgtcgatgagatagtgactgacaattctaccaactttcttctg tgtatctgtgaagatcaggaaaatgttaaggacaaaaaaaaggggaacattttcattgga atggtgggagtgcagcctgccacaggtgaggtcgtgtttgatagtttccaggactctgct tcccgtttggagctcgaaactcggatattgtgcctgcagcccgtggagctactgctcccc tcacacttgtcagagcaaacagagatgcttatccacagagccacagctgctcgtgtgcgg gatgacagaattcgagtagaaaggatggataacgtgtattttgaatacagccatgctttc caggcagttacagagttttatgcaaaagatgtagttgacatccaaggttctcaaagtttt tctggcatcattaacttggagaagactgtgatttgctctttggctgctataataagatac ctcaaagaatttaacttggaaaaggtgctttccaaacccaagaattttaagcagttgtct ggtgaaatggaattcatgacaattaatggaacaacattaaggaatcttgaaatcctacag aatcagactgacatgaaaaccaaaggaagtttactttgggttttagaccatactaaaacc tcatttgggaaacggaagttaaagaagtgggtgacccagccactccttaaactaagggag ataaatgctcgactagatgctgtatcggaagtactccattcagaatccagtgtgtttggt cagatagaaaatcatctacgtaaattgcctgatatagagagaggactctgtagcatttat cacaaaaaatgttctacacaagagttcttcttgattgtcaaaaccctgtatcacctgaag tcagaatttcaagcattaatacctgctgttaattcccacgttcggtcagacttgctccag acatttattttagaaattcctgaactcctcagtccagtggaacgtttcttaaagctactt aatgaacaagctgccaaaagtggggataaaacagaattattcaaagatctttctgacttc cctttaataaaaaagaggaaggatgaaattcaagaagttactcacaggatccaaatacat ttgcaagatatacgaaaaatactaaaaaatccttctgcacagtatgtgacagtatcagga caggagtttatgattgaaataaagaattctgctgtatcttgtataccaactgattgggtt aaggttggaagcacaaaagctgtgagccgctttcactctccttttattgtagaaaattac agacgtctgaatcagctccgggagcagctagtccttgactgcagtgctgaatggcttgat tttctagaggattttagtgaacattatcactccttgtgtaaagcagtacatcacctagca actgttgactgcattttctccctggccaaggtcgctaagcaaggaaattactgcagacca actctacaagaagaaaggaagatcatgattaaaaatggccggcaccctgtgattgacgtg ttgctgggagaacaggatcaatatgttcccaacagtacgaatttatcaggggactcagag agagtaatgataattactggaccaaacatgggtggaaagagctcctacataaaacaagtt gcattgattactatcatggctcagattggctcctatgttcctgcagaggaagcaacaatt ggaattgtggatggcattttcacgaggatgggtgctgcagataatatatataaagggcag agtacctttatggaagaactgactgacacagcagaaataataagacaggccacatcccag tccttggttatcttggatgaattgggaagaggaacaagcacccatgatggaatcgccatc gcttatgctacactggagcattttattaaagatgtgaaatccttaaccttgtttgtcacc cattatccaccagtttgtgaattagaaaaaagttacttacaacaggtgggaaattatcac atgggattcttggtcaatgaggatgaaagcaaagaggatccaggtgaagaacaagtccct gattttgtcacatttctttatcaaataaccagaggaattgcagcaaggagttatggacta aatgtggctaaactagcagatgttcctgaagaaattttaaagaaagcagctagcaagtca aaagaattagaaggattagtaaatatgaaaaggaaaaggctaaagtgttttgcaaagtta tgggtgataaatgatgcaaaaggcctgcaaaagtggagagacgagtttgacgtggaagaa atttcaggcttctcatcttga

Panthera tigris altaica (Amur tiger): 102953993 Help Entry 102953993         CDS       T02988                                  Gene name MSH6 Definition (RefSeq) mutS homolog 6   KO K08737   DNA mismatch repair protein MSH6 Organism ptg  Panthera tigris altaica (Amur tiger) Pathway ptg01524   Platinum drug resistance ptg03430   Mismatch repair ptg05200   Pathways in cancer ptg05210   Colorectal cancer Brite KEGG Orthology (KO) [BR:ptg00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     102953993 (MSH6)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     102953993 (MSH6)   09162 Cancer: specific types    05210 Colorectal cancer     102953993 (MSH6)   09176 Drug resistance: antineoplastic    01524 Platinum drug resistance     102953993 (MSH6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:ptg03400]     102953993 (MSH6) DNA repair and recombination proteins [BR:ptg03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      102953993 (MSH6) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  MutS_V MutS_III MutS_I MutS_IV PWWP MutS_II Motif Other DBs NCBI-GeneID:  102953993 NCBI-ProteinID:  XP_015394174 LinkDB All DBs Position Un AA seq 1262 aa AA seqDB search MEGYPWWPCLVYNHPFDGTFIREKGKSVRVHVQFFDDSPTRGWVSRRLLKPYTGSKSKEA QKGGHFYSSKPEILRAMQRADEALNKDKIERLELAVCDEPSEPEEEEEMEVGATYSSDKS EEDKEIESEEEVPPKVQGSRRSSRQIKKRRVISDSESDVGGSDVEFKPDAKEEGSSDEIS SGVGDSDSEGLDSPVKVASKRKKMVSGNGALKRKSSRKEMPLATKRSTGISSETKSTLSA FSAPQNSESQAHTGGGCEDSSRPTFWYHETLEWLKEEKRRDLHRRRPDHPDFDASTLYVP EDFLNSCTPGMRKWWQIKSQNFDLVIFYKVGKFYELYHMDALIGVNELGLVFMKGNWAHS GFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCRKMAHISKYDRVVRREICRVITK GTQTYSVLEGDPSENYSKYLLSLKEKEEDSSGHTRVYGVCFVDTSLGKFFIGQFPDDRHC SRFRTLVAHYPPVQVLFEKGNLSTETKMILKGSLSSSLQEGLIPGSQFWDAAKTLRTLLE EAYFKEKLNEDSGVMLPQVLKGMTSESDSLGLTPGEKSELALSALGGCVFYLKKCLIDQE LLSMANFEEYIPLDSDRVSATRPGAVFAKANQRMVLDAVTLSNLEIFLNGTNGSTEGTLL EKIDTCHTPFGKRLLKQWLCAPLCSPYAINDRLDAIEDLMAVPDKISDVADLLKKIPDLE RLLSKIHNVGSPLKSQNHPDSRAIMYEETTYSKKKIIDFLSALEGFKVICKIIEIMEEVA DNFKSKILKQVITLQTKNPEGRFPDLTIELNRWDTAFDHEKARRTGLITPKAGFDPDYDQ ALADIRENEQSLLEYLEKQRSRIGCRTIVYWGIGRNRYQLEIPENFITRNLPEEYELKST KKGCKRYWTKTIEKKLANLINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDV LLCLANYSRGGDGPMCRPVILFPEEDTPPFLDLRGSRHPCITKTFFGDDFIPNDILIGCE EEEEENGKAYCVLVTGPNMGGKSTLMRQAGLLAVMAQTGCYIPAEVCRLTPIDRVFTRLG ASDRIMSGESTFFVELSETASILTHATAHSLVLVDELGRGTATFDGTAIANAVVKELAEN IKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECEDPSQETITFLYKFIKGACPKSY GFNAAKLANLPEEIIQKGHRKAREFEKMTQSLRLFREVCLASERSTIDAEAVPKLLTLIK EL NT seq 3789 nt NT seq  +upstreamnt  +downstreamnt atggagggttacccctggtggccttgcctggtttataaccacccttttgatggaacattc atccgcgagaaagggaagtctgtccgagttcatgtacagttttttgatgacagcccaaca aggggctgggttagcagaaggctattaaagccatatacaggttcaaaatcgaaagaagca caaaaaggaggtcatttttatagttcaaagcctgaaatactcagagcaatgcaacgtgca gatgaagccttgaataaagacaagatcgagaggcttgaattggcagtgtgtgatgagccc tcagaaccagaggaagaagaagagatggaggtaggtgcaacttactcatcagataagagt gaagaagataaggaaattgaaagtgaagaagaagtgccacctaaggtgcaaggatctagg cgaagtagccgccagataaaaaaacgaagggtcatatcagattctgagagtgatgttggt ggctctgatgtggaattcaagccagatgctaaggaggaaggaagcagtgatgaaataagc agtggagtgggggacagtgacagtgaaggcttggacagccctgtcaaagttgcttcaaaa cggaagaaaatggtgtctggaaatggcgctctcaaaaggaaaagttcaaggaaggaaatg cccttggccaccaaacgatcaactggcatttcatcagaaaccaagagcactctgagtgct ttctctgcccctcagaattctgaatctcaagcccacactggtggaggatgtgaggatagt agtcgccccactttctggtatcatgaaactttagagtggcttaaggaggaaaagagacga gatctccacaggaggcgacctgatcaccccgattttgatgcatccacactctatgtgcct gaggatttccttaattcctgtactcctgggatgaggaagtggtggcagattaagtctcag aactttgatcttgttattttttataaggtggggaagttttatgagttgtaccacatggat gctcttattggagtcaatgaactcgggctggtattcatgaaaggcaactgggctcattct ggtttccctgaaattgcatttggccgatactctgattctctggttcagaagggctataaa gtagcacgagtggaacagactgagaccccggaaatgatggaggcacgatgccggaagatg gcacatatatctaagtatgacagagtggtgaggagggagatctgtagagtcattaccaag ggtacacagacctacagtgtactggaaggtgacccctctgagaactacagtaagtatctt cttagcctcaaagaaaaagaggaggattcctctggccacactcgagtgtatggagtatgc tttgttgatacctcactgggaaagtttttcataggtcagtttccagacgatcgccactgt tctagatttaggactctagtggcacactaccctccagtacaagtcttgtttgagaaagga aatctctcaacagaaactaagatgattctgaagggttcattatcctcctctcttcaggaa ggtctgataccaggctcccagttttgggatgcagccaaaactttgagaactctccttgaa gaagcatattttaaggaaaagttaaatgaggacagtggggtgatgttaccccaggtgctt aaaggtatgacctcagagtctgattctcttgggttaacaccaggagagaagagtgaattg gccctctctgctctaggtggttgtgtcttctacctcaaaaaatgccttattgatcaagag cttttatcaatggctaattttgaagaatacattcccttggattctgacagggttagtgct acaagacctggtgctgtttttgcaaaagccaatcaacggatggtgctagatgctgtgaca ttaagcaacttggagattttcctgaatggaacaaatggttctactgaagggaccctgcta gaaaagattgatacttgccatactccctttggtaagcggctcctaaagcagtggctttgt gccccactctgtagcccttatgctatcaatgatcgtttagatgctatagaagacctcatg gctgtgcctgacaaaatctctgatgttgcagaccttctaaagaagattccagaccttgag aggctgctgagtaaaattcataatgttgggtctcccctgaagagccagaaccacccagat agcagggctataatgtatgaagaaactacatacagcaaaaaaaagattattgattttctt tctgctctagaaggattcaaagtaatatgtaaaattatagagattatggaagaagttgct gacaactttaagtctaaaatccttaagcaagtcattactttgcagacaaaaaatcctgag ggccgttttcctgatttgactatagaactgaaccgatgggatacagcctttgaccatgaa aaggctcgaaggactggactaattactcccaaagcaggatttgaccctgattatgaccaa gctcttgctgacataagagaaaatgaacagagcctcctggaatacttggagaaacagcgc agtcgaattggctgtaggaccattgtctactgggggattggcaggaaccgttaccagttg gaaattccagagaatttcatcactcgtaatttgccagaagaatatgagttgaaatccacc aagaagggctgtaaacgatactggaccaaaactattgagaagaagttggctaatctgata aacgctgaagagcggagagacgtatcattgaaagactgcatgcggcgactcttctataac tttgataaaaattacaaagactggcagtctgctgttgagtgcatcgcagtattggatgtc ttactgtgcctggctaactacagtcgagggggtgatggccctatgtgtcgtccagtaatt ctgtttccagaagaagacacaccccccttcttggaccttagaggatcacgtcatccctgc attacgaagactttttttggagatgactttattcctaatgacattctaataggctgtgag gaagaggaggaggaaaatggcaaagcttattgtgtgcttgttactggacctaatatgggg ggcaagtcgacactcatgagacaggctggcctgttagctgtaatggcccagacgggttgt tacatacctgctgaagtatgcaggctcacacctattgatagagtatttactagacttggt gcctcagacagaataatgtcaggtgaaagtacattttttgttgaactgagtgaaactgcc agtatccttacacacgcaacagcacattctctggtgcttgtggatgaattaggaagaggt actgcaacatttgatggaacagcaatagcaaatgcagttgttaaagaacttgctgagaac ataaagtgtcgtacattgttttctacccattaccattcattagtggaagattattctcaa aacgttgcagtgcgcctgggacacatggcatgcatggtagaaaatgaatgtgaggatccc agccaggagactattaccttcctgtataaattcattaagggagcttgtcctaaaagctat ggctttaatgcagcaaagcttgctaatcttccagaggagattattcaaaagggacataga aaagcaagagaatttgagaagatgacccaatcactgcgattatttcgggaagtttgcctg gctagtgaaaggtcgactatagatgctgaagctgtccctaagttgctgactttgattaag gaattatag

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