Panthera tigris altaica (Amur tiger): 102955022
Help
Entry
102955022 CDS
T02988
Symbol
CPSF6
Name
(RefSeq) cleavage and polyadenylation specific factor 6
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg03015
mRNA surveillance pathway
ptg03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102955022 (CPSF6)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102955022 (CPSF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptg03019
]
102955022 (CPSF6)
Messenger RNA biogenesis [BR:
ptg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
102955022 (CPSF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
102955022
NCBI-ProteinID:
XP_007082325
LinkDB
All DBs
Position
Un
AA seq
571 aa
AA seq
DB search
MVEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVGDDVGKGAAPNVVYTYTG
KRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSK
KLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQMSGEGKAGPPGGSSRAAFP
QGGRGRGRFPGAVPGGDRFPGPTGPGGPPPPFPGNLIKHLVKGTRPLFLETRIPWHMGHS
IEEIPIFGLKAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPG
QPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPP
HLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPPGRE
MDTARTPLSEAEFEEIMNRNRAISSSAISRAVSDASAGDYGSAIETLVTAISLIKQSKVS
ADDRCKVLISSLQDCLHGIESKSYGSGSRRRERSRERDHSRSREKSRRHKSRSRDRHDDY
YRERSRERERHRDRDRDRDRERDREREYRHR
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggtggaagctgaatatggtgggcatgatcagatagatttgtatgatgatgtcatctct
ccatctgcaaataatggagatgccccagaagaccgtgattacatggatactctcccacca
actgttggtgatgatgtgggtaaaggagcagcaccaaatgttgtctatacgtatactgga
aagagaattgcattgtatatcggaaatctgacatggtggacaacagatgaagacttaact
gaagcagttcattctttgggagtaaatgatattttggagataaaattttttgaaaatcgg
gcaaatggccagtcaaaagggtttgcccttgttggtgttggatctgaagcatcctcaaaa
aagttaatggatctgttgcctaaaagagaacttcatggtcagaatcctgttgtaactcca
tgcaataaacagttcctgagtcaatttgaaatgcagtccaggaaaactacacaatcagga
caaatgtctggggaaggtaaagctggtcctccaggaggcagttcacgtgcagcatttcca
caaggtggtagaggacggggccgttttccaggggctgttcccggtggggacagatttcct
ggaccaacaggaccaggagggccacccccaccttttccaggaaatttgatcaagcatctt
gttaaaggaactcggcctttgttcctggaaactaggattccatggcatatggggcacagc
atagaggaaatacccatttttggcctaaaagctggacagactccaccacgtccaccctta
ggtcctccaggcccacctggtccaccaggtcctccacctcctggtcaggttctgcctcct
cctctagctgggcctcctaatcgaggagatcgcccaccaccaccagttctttttcctgga
caaccttttgggcagcctccattgggtccgcttcctcctggccctccacctccagttccg
ggctacggcccccctcctggtccaccacctccacaacagggaccacctccacctccaggc
ccctttccaccgcgcccacctggccctcttgggccaccccttacacttgctcctcctccg
catcttcctggaccacctccaggtgccccaccaccagctccacatgtgaacccggctttc
tttcctccaccgactaacagcggcatgcctacatcagatagccggggtccaccaccaaca
gatccatatggccgacctccaccgtatgataggggtgactatgggcctcctggcagggaa
atggatactgcaagaacgccattgagtgaagctgagtttgaagaaatcatgaatagaaat
agggcaatctcaagcagtgctatttcaagagctgtgtctgatgccagtgctggtgattat
gggagtgctattgagacattggtaactgcaatttctttaattaaacaatccaaagtatct
gctgatgatcgctgcaaagttcttattagctctttgcaagattgccttcatggaattgaa
tccaagtcttatggttctggatcaagaagacgtgaacgatcaagagagagggaccatagt
agatcacgagaaaagagtcggcgtcataaatcccgtagtagagatcgtcatgatgattat
tatagagagagaagcagagaacgagagagacaccgggaccgggaccgagaccgggaccga
gaacgtgaccgagaacgcgagtatcgtcatcgttag
DBGET
integrated database retrieval system
