Panthera tigris altaica (Amur tiger): 102956312 Help Entry 102956312         CDS       T02988                                  Symbol COL2A1 Name (RefSeq) collagen type II alpha 1 chain   KO K19719   collagen type II alpha Organism ptg  Panthera tigris altaica (Amur tiger) Pathway ptg04151   PI3K-Akt signaling pathway ptg04510   Focal adhesion ptg04512   ECM-receptor interaction ptg04974   Protein digestion and absorption ptg05165   Human papillomavirus infection Brite KEGG Orthology (KO) [BR:ptg00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     102956312 (COL2A1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     102956312 (COL2A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     102956312 (COL2A1)  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     102956312 (COL2A1)  09160 Human Diseases   09172 Infectious disease: viral    05165 Human papillomavirus infection     102956312 (COL2A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:ptg00536]     102956312 (COL2A1) Glycosaminoglycan binding proteins [BR:ptg00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    102956312 (COL2A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  102956312 NCBI-ProteinID:  XP_015399669 UniProt:  A0A8C9KPS6 LinkDB All DBs Position Un AA seq 1473 aa AA seqDB search LLVAAVLRCHGQDVQKAGSCVQDGQRYNDKDVWKPEPCRICVCDTGTVLCDDIICEDMKD CLSPETPFGECCPICSTDLATASGQPGPKGQKGEPGDIKDIVGPKGPPGPQGPAGEQGPR GDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFAAQMAGGFDEKAGGA QMGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDD GEAGKPGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSP GENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAK GEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFP GPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGAR GEPGGAGPVGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEP GLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEP GKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPP GEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAS GPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPP GPAGANGEKGEIGPPGPAGTAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEA GQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNP GPPGPPGPSGKDGPKGARGDSGPPGRAGDPGLQGPAGPPGEKGEPGDDGPSGPDGPPGPQ GLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPSGEP GREGSPGADGPPGRDGAAGVKGDRGETGPVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQ GPMGPAGPAGARGIPGPQGPRGDKGEAGEAGERGLKGHRGFTGLQGLPGPPGPSGDQGAS GPAGPSGPRGPPGPIGPSGKDGANGIPGPIGPPGPRGRSGETGPAGPPGNPGPPGPPGPP GPGIDMSAFAGLGQREKGPDPLQYMRADQAAGNLRQHDAEVDATLKSLNNQIESIRSPEG SRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETGETCVYPNPASVPKK NWWSSKSKDKKHIWFGETINGGFHFSYGDDNLAPNTANVQMTFLRLLSTEGSQNITYHCK NSIAYLDEAAGNLKKALLIQGSNDVEIRAEGNSRFTYTVLKDGCTKHTGKWGKTMIEYRS QKTSRLPIIDIAPMDIGGPEQEFGVDIGPVCFL NT seq 4422 nt NT seq  +upstreamnt  +downstreamnt ctgctcgtcgccgctgtccttcggtgtcacggccaggatgtccagaaggctggcagctgt gtgcaggacgggcagaggtataatgataaggatgtgtggaagcccgagccctgccggatc tgtgtctgtgacactgggactgtcctctgcgacgacataatctgtgaagacatgaaagac tgcctcagccctgagacccccttcggagagtgctgccccatctgctcaactgacctcgcc actgccagtgggcaaccaggaccaaagggacagaaaggagaacccggagacattaaggat attgtaggacccaaaggacctcctgggcctcagggacctgcaggtgaacaaggacccaga ggggatcgtggcgacaaaggtgaaaaaggtgcccctggaccgcgtggcagagacggagag cctgggacccctggaaatcccggcccccctggtcctcctggcccccctggcccccctggc cttggtggaaactttgctgcccagatggccggaggatttgatgagaaggctggtggtgcc cagatgggagtgatgcaagggccaatgggccccatgggacctcgagggcctccaggccct gctggtgctcccggacctcaaggatttcaaggcaaccctggagaacctggggaacccggt gtctctggtcccatgggtccccgcggtcctcctggcccccctggaaagcctggcgatgat ggtgaagccggaaagcctggaaaatctggtgaaagaggccctcctggccctcagggtgct cgcggcttcccgggaaccccaggccttcctggcgtcaagggtcacagaggctacccaggt ctagatggtgctaagggagaagctggtgctccaggtgtgaagggtgagagtggttcaccg ggtgagaatggttccccgggcccaatgggtccccgaggcctgcctggtgagagaggacgg actggccccgctggggctgcgggtgcccggggcaacgacggtcaaccaggccctgctggg cctccgggtcccgtgggtcctgctggcggtcctggcttccctggtgctcccggtgccaag ggtgaagctggccccactggtgctcgaggccccgaaggcgctcaaggtcctcgcggtgaa cctggtactcctgggtcccctggaccagccggtgcctctggtaaccctggaactgatgga attcctggagccaaaggatctgctggtgctccgggcatcgctggtgctcccggcttccct gggccccgtggtccacctggccctcaaggtgcaactggtccgctgggcccgaaaggtcag acgggtgagcctggtattgctggcttcaaaggcgaacaaggccccaagggagagcctggc cctgctggcccccaaggagcccctggtcctgctggtgaggaaggcaagagaggtgcccgt ggagagcctggtggtgctgggcccgttggtccccctggagaaagaggtgctcctggcaac cgtggcttcccaggtcaagatggtctggcaggtccaaagggagcccctggagagcgaggg cccagcggccttgctggccccaagggtgccaacggcgatcctggccgtcccggagagcct ggccttcctggagcccggggtctcactggacgccccggtgatgccggtcctcaaggcaaa gttggtccttctggagcccctggtgaagatggtcgtcctggacctccaggtcctcagggt gctcgtgggcagcctggtgtcatgggtttccccggccccaaaggtgccaatggcgaacct ggcaaggctggtgagaagggacttcctggtgcccctggactgagaggtcttcctggcaaa gatggtgagaccggtgctgcggggccccccggacccgcgggccctgccggtgaacgaggc gagcagggtgcccctgggccatctgggttccagggacttcctggccctcccggtccccca ggtgaaggtggaaagccaggtgaccagggtgttcctggtgaagctggagcccccggcctc gtgggtcccaggggtgaacgaggtttcccaggtgaacgtggctctcccggtgcccagggc ctccagggtccccgcggcctccctggcactcctggcacggacggccccaaaggcgcatct ggcccagccggcccccctggggctcagggccctccaggtctgcaggggatgcccggtgag aggggagcagctggcatcgctgggcccaagggagacaggggtgacgttggtgagaaaggc cctgagggagcccctgggaaggacggtggacgaggcctgactggtcccattggcccccct ggccctgccggtgccaatggtgagaagggagaaattggacctcctggtcctgcgggaact gctggtgctcgtggcgccccgggtgaacgtggagagaccggcccccccgggcccgctgga ttcgcaggacctcccggtgctgatggccagccaggtgccaagggcgagcaaggagaggct ggccagaaaggtgatgctggtgccccgggtcctcagggcccctctggagctcctggacct cagggtcctactggtgtgactggtcctaaaggagcccgaggtgctcaaggtcccccggga gccaccggattccctggagctgctggccgtgtcggacccccaggctccaatggcaaccct ggaccccctggtccccctggtccttctggaaaagatggtcctaaaggtgctcgaggagac agcggcccccctggccgtgctggcgaccctggcctccaaggtcctgccgggccccctggc gagaagggagagcctggagatgatggtccctctggtcccgatggtcctccaggtccccaa ggtctggctggtcaaaggggcattgttggtcttcctgggcaacgtggtgagagaggattc cccggcctgcctggcccatcgggtgagcctggcaagcagggagctcccggagcatctggc gaccgaggtccccccggccccgtgggtcctcctggcctgactggtccttctggcgaacct ggacgagagggaagccctggtgctgatggcccccctggcagagatggtgcggctggagtc aagggtgatcgtggtgagactggtcccgtgggtgctcctggagcccctgggccccctggc tctcctggccccgctggcccaactggaaagcagggagaccgaggagaagctggcgcacaa ggccccatgggccctgcaggaccagcaggagcccggggaatcccaggtcctcaaggtccc cgaggtgacaaaggagaagctggagaggctggcgagaggggactgaagggacaccgtggc ttcactggtctgcagggtctgcccggccctcctggtccttctggagaccaaggtgcttct ggtcctgctggtccttctggccctagaggtcctcctggtcccatcggtccctctggcaaa gatggtgctaatggaatccctggccccattggacctcctggtccccgcggacgttcgggc gaaactggcccggctggtcctcctggaaaccccggaccccctggccctccaggtccccct ggccctggcatcgacatgtctgcctttgctggcctaggccagagagagaagggccccgac cccctgcagtacatgcgggctgaccaggcagctggcaacctgagacagcacgacgccgag gtggatgccacgctcaagtccctcaacaaccagattgagagcatccgcagccccgagggc tcccgcaagaaccccgctcgcacctgccgggacctgaaactctgccaccctgaatggaag agcggagactactggattgaccccaaccagggctgcaccttggacgccatgaaggttttc tgcaacatggagactggcgagacctgcgtctaccccaacccggcgagtgttcccaagaag aactggtggagcagcaagagcaaggacaagaagcacatctggttcggagaaaccatcaac ggtggcttccacttcagctatggagatgacaacctggctcccaacactgccaacgtccag atgaccttcctacgcctgctgtccaccgagggctcccagaatatcacctaccactgcaag aacagcatcgcctacctggatgaagcggctggcaacctcaagaaggccctgctcatccag ggctccaatgatgtggagatccgggctgagggcaacagcaggttcacatatactgtcctg aaggatggctgcacgaaacacaccggtaagtggggcaagactatgatcgagtaccggtca cagaagacctcgcgtctccccatcattgacattgcacccatggacataggagggcctgag caggaatttggtgtggacatagggcctgtctgcttcttgtaa

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