KEGG   Panthera tigris altaica (Amur tiger): 102970727Help
Entry
102970727         CDS       T02988                                 

Gene name
SETDB1
Definition
(RefSeq) SET domain bifurcated 1
  KO
K11421  histone-lysine N-methyltransferase SETDB1 [EC:2.1.1.43]
Organism
ptg  Panthera tigris altaica (Amur tiger)
Pathway
ptg00310  Lysine degradation
ptg04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:ptg00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    102970727 (SETDB1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    102970727 (SETDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ptg03036]
    102970727 (SETDB1)
Enzymes [BR:ptg01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.43  histone-lysine N-methyltransferase
     102970727 (SETDB1)
Chromosome and associated proteins [BR:ptg03036]
 Eukaryotic Type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     102970727 (SETDB1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    102970727 (SETDB1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: SET DUF5604 Tudor_4 TUDOR_5 Pre-SET MBD DUF4537 53-BP1_Tudor Chromo
Motif
Other DBs
NCBI-GeneID: 102970727
NCBI-ProteinID: XP_007088148
LinkDB All DBs
Position
Un
AA seq 1288 aa AA seqDB search
MSSIPGCIGLGAAAAAVESDEIAELQQAVVEELGISMEELRQFIDEELEKMDCVQQRKKQ
LAELETWVIQKESEVAHVDQLFDDASRAVTNCESLVKDFYSKLGLQYRDSSSEDEASRPT
EIIEIPDEDDDVLSIDSGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSSQDL
HKGTLSQMSGELSKDGDLIVSMRILGKKRTKTWHKGTLIAIQTVGPGKKYKVKFDNKGKS
LLSGNHIAYDYHPPADKLFVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDG
YASYVTQSELYPICRPLKKTWEDIEDISCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASALEKKQGGPLRTR
PNMGAVRSKGPVVQYTQDLTDPPQPPAPPAPPAPPAPPAPPAPPVSPQAGDNDSLESQLA
QSRKQVAKKSTSFRPGSVGSGHSSPTSPALSENVPAGKPGSNQTYRSPLGPTASAPAAPP
APPVPPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSYTCLSRVRPMRSAQYRGKNPLLVP
LLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETGCDFLFLEMFCLDPY
VLVDRKFQPYKPFYYILDITYGKEDVPLSCVNEIDTTPPPQVAYSKERIPGKGVFINTGP
EFLVGCDCKDGCRDKSKCACHQLTIQATACTPGGQINPNSGYQYKRLEECLPTGVYECNK
RCKCDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFAD
KEGLEMGDEYFANLDHIESVENFKEGYESDAPCSSDSSGVDLKDQEDGNSGTEDPEESND
DSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSETASKDSRPPDLGPSHIPVPPAI
PGGGCNPPSSEETPKNKVASWLSCNSVSEGGFADSDSRSSFKTNEGGEGRAGGGRGEAEK
ASTSGLGFKDEGDLKQAKKEDPDDRNKMSLITESSRNYGYNPSPMKLEGLRRPPSKTSMH
QSRRLMASAQSNADDVLTLSSSTESEGESGTSRKPTTGQTSATAVDSDDIQTISSGSEAD
DFEDKKNMSGPAKRQVAVKSTRGFALKSTHGIAIKSTNMASVEKGESAPVRKNTRQFYDG
EESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTW
DYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq 3867 nt NT seq  +upstreamnt  +downstreamnt
atgtcttccatccctgggtgcattggtttgggtgcagccgcagctgcggtggagtctgat
gagatcgcagagctgcaacaagcagtggttgaggagctgggtatctcaatggaggaactg
aggcagttcattgatgaagaactggagaagatggactgtgtacagcagcgaaagaagcaa
ctagcagagttggagacgtgggtaatacagaaggaatctgaggtggcccatgttgatcag
ctctttgatgatgcatccagggcagtgactaactgtgagtctttggtgaaggacttttat
tccaaactgggactacaataccgggacagtagctctgaggatgaagcctcccggcctaca
gaaataatcgagattcctgatgaagatgatgatgtcctcagtattgattcaggtgatgct
gggagcagaacacccaaagaccagaagctccgtgaggctatggctgccttaagaaagtca
gctcaagatgtccagaagttcatggatgctgtcaacaaaaagagcagctcccaagatcta
cataaaggaaccttgagtcagatgtctggagaactgagcaaagatggtgacctaatagtc
agcatgcgcatcctgggcaagaagagaactaagacatggcacaaaggcacccttattgcc
atccagacggtcggaccaggaaagaagtacaaggtgaaatttgacaacaaagggaagagt
ctactgtcagggaaccatattgcctatgattaccaccctcctgctgacaagctgtttgtg
ggcagtcgagtggtggccaagtacaaggatgggaatcaggtctggctctatgctggcatt
gtagctgagacaccaaacgtcaaaaacaagctcaggtttctcattttctttgatgatggg
tacgcttcctatgtcacacaatctgaactgtatcccatttgccggccactgaaaaagaca
tgggaggacatagaagacatctcctgccgagacttcatagaggagtacatcacagcctac
cccaaccgccctatggtgctactcaagagtggccagcttatcaagactgagtgggaaggc
acatggtggaagtcccgggtcgaggaggtggacggcagcctagtcaggatcctcttcctg
gatgacaaaagatgcgaatggatctatcgaggctccacacggctagagcccatgttcagc
atgaagacctcctcagcctccgcactagagaagaagcaagggggaccgctcaggacacgt
ccaaatatgggtgctgtgaggagcaaaggccctgtggtccagtacacccaggatctgacc
gaccccccccagccgccagcccctcctgctccccctgccccacccgctccccctgccccc
cctgctccccctgtgtccccgcaggcaggtgacaatgacagcttggaaagtcagcttgcc
caatctcggaagcaggtagccaaaaagagcacatccttccgaccaggatctgtgggctct
ggtcattcctcccctacatctcctgcactcagtgaaaatgttcctgctgggaaacctggg
agcaaccagacatatagatcacctttaggcccaacagcctctgccccagcagcgccccca
gcacctcccgtgcccccagccttccatggcatgttagaacgggccccagcggagccctcc
taccgtgcccccatggagaagctcttctatttacctcatgtgtgcagctatacgtgtctg
tctcgagttagacctatgagaagtgcacagtaccggggcaagaacccactgctggtcccg
ctgctctatgacttccggcggatgacagcccgtcgccgagttaaccgcaagatgggcttt
catgtgatctataagacaccctgtggcctctgccttcggacaatgcaggagattgaacgc
tatctttttgagactggctgtgacttcctcttcctggagatgttctgtttggatccatat
gttcttgtggaccgcaagtttcagccctataaacctttttactacattctggacatcacc
tatgggaaggaagatgtccccctatcctgtgtcaatgagattgacacaacccccccaccc
caggtggcctacagtaaggaacgaatcccgggcaagggtgttttcattaacacaggccca
gaatttctggtcggctgtgactgcaaggatgggtgccgtgacaagtccaagtgtgcctgt
caccagctaactatccaggccacagcctgtaccccgggcggccagatcaaccctaattct
ggctaccagtacaagagactagaagagtgtctgcccacaggagtttatgagtgtaacaaa
cgttgtaaatgtgacccaaacatgtgcacaaaccggttggtgcagcacgggctccaggtt
cggctacagctattcaagacgcagaacaagggctggggtattcgctgcttggatgacatt
gccaaaggatccttcgtctgtatttatgcaggcaagatcctgacagatgactttgcggac
aaggagggcctggagatgggtgatgagtactttgccaatctggaccatatcgagagtgtg
gagaacttcaaggaaggatatgagagtgatgccccctgttcgtccgacagcagcggggtg
gacttgaaggaccaggaagatggcaacagcggtacagaggatcccgaagagtccaatgac
gacagttccgatgataacttctgtaaagatgaggacttcagtaccagctctgtgtggcgc
agctatgctacccggaggcagacccggggccaaaaggaaaacggactgtctgagacggct
tccaaggactcccgccccccagaccttgggccctcccatattcctgtccctccagcgatc
cctgggggtggctgcaatccgccttcctctgaagagacacccaagaataaggtggcctca
tggttgagctgcaatagtgtcagtgaaggtggctttgctgactctgatagccgttcatcc
ttcaagactaacgaaggtggggaaggccgggctgggggaggcagaggggaggctgagaag
gcctccacctcagggctgggcttcaaggatgagggagacctcaagcaggccaagaaagag
gaccccgatgaccgaaacaagatgtccttaatcactgaaagctctcgaaattatggttac
aatccttctcccatgaaacttgaaggacttcgccgcccacctagtaagactagtatgcat
cagagccgacgactcatggcctctgctcagtccaacgctgatgatgtcttaacactgtcc
agcagcacagaaagcgagggggaaagtgggaccagccggaagcccaccaccggccagact
tcagccacagcagtggacagcgatgatatccagaccatctcctctggctctgaagcagat
gactttgaggacaagaagaacatgtctggtccagcaaagcgccaggtggcagtaaaatca
acccggggctttgctcttaagtcaacccatgggattgccattaagtcaaccaacatggca
tccgtggaaaagggggagagcgcacctgtccgtaagaacacacgccagttctacgatggg
gaggagtcttgctacatcatcgacgccaagctcgaaggcaacctgggccgctacctcaat
cacagctgcagccccaacctgtttgtccagaatgtctttgtggacactcacgatcttcgc
ttcccctgggtggccttctttgccagcaagaggatccgggccgggactgagctgacttgg
gactacaactatgaggtgggcagtgtggaaggcaaggagctgctgtgctgctgcggggcc
attgaatgcagggggcggcttctgtag

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