Pelotomaculum thermopropionicum: PTH_1242
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Entry
PTH_1242 CDS
T00519
Name
(GenBank) uncharacterized conserved protein
KO
K10979
DNA end-binding protein Ku
Organism
pth
Pelotomaculum thermopropionicum
Pathway
pth03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
PTH_1242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pth03400
]
PTH_1242
DNA repair and recombination proteins [BR:
pth03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
PTH_1242
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
zinc_ribbon_2
Motif
Other DBs
NCBI-ProteinID:
BAF59423
UniProt:
A5D2W0
LinkDB
All DBs
Position
1281789..1282649
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AA seq
286 aa
AA seq
DB search
MRPLWKGAVSFGLVYVPVKLYPATRSRDVKFNYLHEKCKTPVQYRRYCPYCGSEVPLDEI
VRGYEYEKGRYVVLTEADFENLAGEDGKRSVEILDFVDLAEIDPLYYEKAYYLAPGDGGA
KVYELLKRAMSETGKAAVARVAIRSRQSLAAIRVSGNALVMNLMHYPDEIQKADAIPEMQ
YEVSLHQNELKMAVSLISSLSAGFRPEKYTDTYRQELMDLIQAKISGEAVEVPARPDTGK
VVDLMEALKASIELAREERGGKAAAEEAGFTGGAGPGKKAARRKTS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccgttatggaagggagccgtcagcttcgggctggtgtatgtgcccgttaaactt
tatccggctaccaggagcagggacgtgaaatttaactaccttcatgaaaaatgcaaaact
cctgtgcagtacaggcgttactgtccttactgcggctccgaggtgcccctggatgaaatt
gtgcgcgggtatgaatatgaaaaaggcaggtacgttgtgctcaccgaagccgactttgaa
aacctggcgggagaggacggcaagaggagtgttgaaattctggactttgtcgacctggcc
gagatcgacccgctttattacgaaaaagcatactacctggcgccgggggacgggggggcc
aaggtgtacgaactgctgaaaagggccatgagcgagaccggaaaggcggcggtggccagg
gttgccatcagaagccgccagtccctggcggcaatccgggtgagcggcaacgccctggtg
atgaacttgatgcactatcccgacgagattcagaaggcagatgcgattccggaaatgcaa
tacgaagtaagcctgcatcaaaacgagctgaaaatggcggtaagccttatcagcagcctt
tccgccgggttccgcccggagaaatataccgacacgtacaggcaggagctgatggacttg
attcaggccaaaatcagcggagaggcggttgaagttccggccaggccggacaccgggaag
gttgtcgacctgatggaagcgcttaaggccagcatagagctggccagagaagaacggggt
ggcaaggcggcggcagaagaagcgggctttaccggcggcgcaggtcctgggaaaaaagcc
gcacggcgcaaaacgtcttaa
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