Phaeodactylum tricornutum: PHATRDRAFT_50825
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Entry
PHATRDRAFT_50825 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K11338
RuvB-like protein 2 [EC:
5.6.2.3
]
Organism
pti
Phaeodactylum tricornutum
Pathway
pti03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
PHATRDRAFT_50825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pti03036
]
PHATRDRAFT_50825
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pti03037
]
PHATRDRAFT_50825
Enzymes [BR:
pti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
PHATRDRAFT_50825
Chromosome and associated proteins [BR:
pti03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
PHATRDRAFT_50825
Chromatin remodeling factors
SRCAP complex
PHATRDRAFT_50825
INO80 complex
PHATRDRAFT_50825
INO80 complex (yeast)
PHATRDRAFT_50825
SWR1 complex
PHATRDRAFT_50825
ASTRA complex
PHATRDRAFT_50825
Cilium and associated proteins [BR:
pti03037
]
Motile cilia and associated proteins
Dynein assembly factors
PHATRDRAFT_50825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
RuvB_N
AAA_16
AAA_22
Mg_chelatase
DnaB_C
AAA_5
AAA_19
AAA_28
AAA_25
AAA_17
IstB_IS21
bpMoxR
SRPRB
Parvo_NS1
AAA_18
nSTAND3
AAA_7
AAA_33
KTI12
Motif
Other DBs
NCBI-GeneID:
7197901
NCBI-ProteinID:
XP_002178405
JGI:
50825
UniProt:
B7FUZ3
LinkDB
All DBs
Position
4:1319378..1321285
Genome browser
AA seq
451 aa
AA seq
DB search
MSASEIQFQSTTKDTAQLERIGAHSHIRGLGLNELLEPVDTSTHNMVGQEKARRAMGVVL
KMIRAGKIGGRSVLLAGPPSTGKTALAMALSQELGTDVPFTNLSASQVFSLELSKTEALT
QAVRRSMGVRINEETEIIEVALANKDSPNRMETIYDLGSKMIDMLRSEKVSAGDVIRIDK
ASGKISKLGRSFSRSRDYDAVSSTTKFVQTPEGELQKRKQVTHVVSLHEIDVINSRQQGF
MALFAGDTGEIRQEIRDQIDAKVAEWREEGRATLVPGVLFIDEVHMLDMECFSFLNRALE
SEMAPVLVIATNRGLSKIRGSQYVSPHGIPVDLLDRLMIVATEPYDVAEIRQILSVRVQE
EEVDMDPTALELLTRIASETSLRYAIHLIITSQLTATKRKSKVVELADIERVYSLFVDIK
RSTKLLMEYQKEFMYNDNRQSRKQLAKLALG
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcttccgaaattcaattccagagcacgaccaaagatacggcgcaactcgagcgc
atcggagcacactcgcatattcgcggtttgggtctcaatgagctcctagaacccgtggat
acttccacacacaatatggtgggccaggaaaaggcaagacgagccatgggagttgttctc
aaaatgattcgagcagggaagattggtggacgctccgtattgttggcgggcccgcccagt
acgggcaaaacggccttggccatggccttgtcgcaggaactcggaacggatgtccccttt
accaatctctccgcctcgcaagtcttttcactcgaactcagcaagaccgaggccttgacg
caggctgtccgaagatccatgggtgtacgcattaatgaagagacggaaatcatcgaagta
gcattagcaaacaaggactcaccaaatcggatggaaacaatttacgatttgggcagtaaa
atgattgacatgctgcgatccgaaaaagtgtcggccggagacgttattcgtatcgacaag
gcgtcggggaaaattagcaagcttggacggagcttcagccgctcccgtgactacgatgcc
gtcagcagcaccaccaaatttgtccagacgccggaaggagaactacagaaacgcaaacag
gttacccacgtcgtcagtctacacgaaattgacgttatcaattcacgacagcagggcttt
atggcactctttgccggagatacgggagaaatacgtcaagaaatacgggatcagattgac
gccaaggtggccgaatggcgagaggaaggacgcgctacgctggtccccggagtcctcttt
attgacgaagtccacatgctggatatggagtgcttttcctttttgaaccgcgccctggaa
tcggaaatggccccggttttggtgattgccaccaaccgcggcctttccaaaattcgcggc
agtcagtacgtgagtccacacggcattcccgtcgacttgctggatcgactcatgattgtc
gccaccgaaccgtacgacgtagccgagattcggcaaattttgtcggtccgtgtgcaagag
gaagaagtcgacatggatccgaccgcattggaactgcttacgcgaattgcgtcggaaacg
agcctacggtacgcgattcatttgattatcacctcgcaactgactgcaaccaagcgcaaa
agcaaagtcgtcgaattggccgacattgaacgcgtctactctctctttgtcgacattaaa
cgttccaccaagctcttaatggagtatcagaaggaattcatgtacaatgacaatcgccaa
agccggaaacagttggcgaagctagcacttggatag
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