Phaeodactylum tricornutum: PHATR_843
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Entry
PHATR_843 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
pti
Phaeodactylum tricornutum
Pathway
pti00280
Valine, leucine and isoleucine degradation
pti01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PHATR_843
Enzymes [BR:
pti01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
PHATR_843
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Dala_Dala_lig_C
ATP-grasp
GARS_A
DUF3182
Motif
Other DBs
NCBI-GeneID:
7204016
NCBI-ProteinID:
XP_002186425
JGI:
843
UniProt:
B5Y589
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Position
3:complement(869910..871310)
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AA seq
467 aa
AA seq
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KVLIANRGEIACRVIRTCQRLGIPTVAIYSSADGPDCLHARMADESYQIGTGPTPRESYL
QPDDILRVALDTGVHAIHPGYGFLSENAAFAELVTNHRMTLVGPPPSAMTAMASKSRSKA
IMEAAGVPTTPGYFDQMGLPEHQTVEFLLSQAVRIGFPVLIKAVMGGGGKGMRLVGQESE
FDDALRACQREAQSAFGNADVLLEKYLVRPRHVEVQIVADSHGNVVHLFERDCSLQRRHQ
KIIEEAPASDLPPDLRARLGENGCQAARAVGYVNAGTVEFLLDTTTPGDFFFCEMNTRLQ
VEHPITEQITGVDLVEWQLRIAAGEVLPKTQDELYARGHAFEARVYAEHPARGFLPATGT
VWHHQPPAPVNQGSCKESGIRVDTGLQAGQQVGVYYDPMISKLIVHDTDRTAALQKLVRA
LKGYQIAGVPTNIDFLIKCATHPTFGKAGAVNTGFLEDFADDVRMEE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
aaggtcttgatcgcgaatcgcggagagattgcctgccgcgtcatacgcacgtgtcagcgt
ttgggcatccccacggtggctatttattcctccgccgacggacccgactgtctccacgcg
cgcatggcggacgaatcctaccagattgggaccggacccacgccgcgtgaatcctaccta
caacccgacgatattctacgcgtggccctcgacacgggcgtgcacgccattcaccccgga
tacggattcttgtcggaaaatgccgcctttgcggaactcgtcaccaaccaccgtatgact
ctggtcggtccgccgccgtccgccatgacggccatggccagcaagtcccgatccaaagcg
attatggaagccgccggcgtccccacgacacccggctatttcgaccagatgggactgccg
gaacaccaaacggttgagttcttgttgtcgcaggctgtccggatcggctttcccgtcctc
atcaaggccgtcatgggcggcgggggcaaaggtatgcgcttggtcggacaggagtcggaa
ttcgacgatgccttgcgggcctgtcagcgagaggcacaatcagcctttggcaacgccgat
gtcttgctcgaaaaatatctcgtcagaccccgacacgttgaagtgcaaattgtcgccgac
agccacgggaacgtcgtacatttgtttgaacgcgactgtagtctccaacgacggcaccag
aagattattgaagaagcgcccgccagcgacttgccccccgacttgcgcgctcgactcggt
gaaaacggctgccaagccgcccgcgccgtgggctacgtcaatgccgggacggtcgaattc
ttgctcgacaccaccacacccggcgacttcttcttttgcgaaatgaacactcgtctccaa
gtcgaacaccccattacggaacaaattacgggcgtcgacttggtggaatggcagttgcgc
attgccgctggggaagttttgccgaaaacacaagacgaactgtacgcccgtggtcacgcc
tttgaagcccgtgtgtacgcggagcatccagctcggggctttttgccggccacgggaacg
gtatggcatcatcagccgccggctcccgtgaaccaagggtcgtgtaaggagagtggcatt
cgtgtcgacaccggactccaagccgggcagcaagtcggcgtgtactacgatcccatgatt
tccaaactgattgttcacgatacggatcggacggcagcgttgcaaaaactagtccgggct
ctcaaggggtaccagattgctggtgtgccgacgaacattgactttttaatcaaatgcgcg
actcatccaacctttggcaaagccggtgcggtcaatacgggattcttggaagacttcgcg
gacgatgtacgaatggaagag
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