KEGG   Parageobacillus thermoglucosidasius DSM 2542: AOT13_17340
Entry
AOT13_17340       CDS       T04476                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ptl  Parageobacillus thermoglucosidasius DSM 2542
Pathway
ptl03410  Base excision repair
ptl03430  Mismatch repair
ptl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ptl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AOT13_17340
   03430 Mismatch repair
    AOT13_17340
   03440 Homologous recombination
    AOT13_17340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ptl03400]
    AOT13_17340
DNA repair and recombination proteins [BR:ptl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     AOT13_17340
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     AOT13_17340
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      AOT13_17340
SSDB
Motif
Pfam: ssDNA-exonuc_C RecJ_OB DHH DHHA1 TetR_C_32
Other DBs
NCBI-ProteinID: ALF11639
UniProt: A0A369WVP8
LinkDB
Position
complement(3515465..3517822)
AA seq 785 aa
MLIAKTRWDVKRPDENIVKHLVEQLRIDPLIATLLVHRGVRTAEEANAFLYPLKQPFYDP
FLLDGMERAVARIQRAIQDGEHILVYGDYDADGVSSTTVMVSALKEAGAIVDFYIPNRFT
EGYGPNEKAFRWAKDQGFSLIITVDNGIAAVKEVALANELGMDVIITDHHEVGPTLPEAY
EIIHPKKPGSTYPFRELAGVGVAFKVAHALLGEVPRYLLDVAAIGTIADLVSLTGENRVL
VAQGLEQLRKTKRIGLRALCTQCGIDAEKIDEQTVGFIIAPRMNAAGRLGEADPAVRLLM
TEDEEEAKRLAKEMDDLNRERQQLVAEIAEEAAQIIQEQFPPSENKVLVVAKEGWNPGVI
GIVASRLVEQFYRPTIVLSIDVEKGIAKGSARSIHGFDMFSSLSTCRDILLHFGGHPMAA
GMTLSLEDVGELRRRLNALADDMLTDDDFTPITSIDAVCSVSDLTMAVAEQLEKFAPFGV
GNAKPLFLMENVSVETMRRVGADQSHLKAVFAQNGAAIDSVGFGFGYLRDEIAPDAKVSV
VGELVINEWNHLRKPQLMIYDMAVHECQLFDIRGMRDVRSLIAALPPDKRMLIMFREDTA
DALGIGAYKEEIYYAASAEEASRLCLDGRYVVLLDMPPSLEMIKMLLRSSLPARIYALFY
QRETHFFRTLPTREHFKWFYAFLRKRGMFNLAKHGGELARARGWTEETVWFMAKVFLELE
FITQRDGIVSLVPQPAKRDLSESPTYRLKQAQYELESLFLYSTYEQLKRCLFEMKGLHTY
EEANA
NT seq 2358 nt   +upstreamnt  +downstreamnt
atgttaatcgcaaaaacacgttgggatgtaaaacggcccgacgaaaatatcgtaaagcat
ttagtggaacaattgcggatcgatccgcttattgccacccttcttgtccatcgcggagtc
cgcacggcagaagaggcgaacgcgtttttatatccgctgaaacaaccgttttatgatccg
tttttgctagatgggatggagcgggcggtcgcgcggattcagcgggcgatacaggatggg
gagcatattttagtatatggcgattatgatgcggacggcgtaagcagcacgacggtaatg
gtcagtgcgctgaaggaagctggcgccattgtggatttttacattcccaaccgctttacc
gaaggatatggcccgaatgaaaaagcgtttcgctgggcaaaggatcagggattttccttg
attattacggtcgataatggcattgccgcggtgaaggaagtggcgcttgccaacgagctc
gggatggatgtcattattaccgaccatcacgaagtggggccgacgctgccggaagcgtat
gaaatcattcatccgaaaaagcctggaagtacatatccgtttcgagaattagccggggtt
ggagtggcgtttaaagttgcgcatgcgctgctcggagaggtgccgcgctatttattggat
gtcgccgcaatcggaacgatcgccgatctcgtttcccttaccggcgaaaatcgcgtattg
gtggcgcaagggcttgagcagttgcgaaagacaaaacgtataggattgcgcgcattgtgt
acacaatgcgggatagacgcagaaaaaattgacgagcaaacggtgggatttatcattgcg
ccgcggatgaatgcggccgggcgattgggggaagccgatcccgctgtaagattgctgatg
acggaggatgaagaagaagcaaaaaggcttgcgaaagaaatggatgatttaaaccgggaa
cggcagcagcttgtcgcggaaatcgcggaagaagcggcacaaatcatacaggaacaattt
ccgccatctgagaataaagtgctggtggtggccaaagaaggatggaatcccggagtcatt
ggcattgttgcatcccggctggtcgaacagttttatcgcccgacgatcgtgctaagcatt
gatgtggaaaaaggaattgcgaaaggttcggcgcgaagcattcacgggtttgatatgttt
tcaagcttgtcgacgtgccgcgatattttgctgcattttggcggccatccgatggcagcg
ggaatgacgctgtctcttgaagatgttggcgaattgcgccggcgtcttaacgcgcttgct
gacgatatgctgacagacgatgattttacgccaataacatcgattgacgcggtttgttcc
gtatctgatttaaccatggcggtggcggagcagctggaaaaattcgctccatttggtgtc
ggtaatgccaaacctctttttttaatggaaaatgtgtcagtggaaacgatgcgccgcgtc
ggtgccgatcaatcgcatttaaaggccgtttttgcgcaaaatggcgctgcaattgatagc
gttggcttcggcttcggatatttgcgcgatgaaatcgctccggatgcgaaagtgtcggtt
gtcggcgagcttgttattaatgagtggaatcatcttcgcaagccgcagctgatgatttat
gatatggcggtgcatgaatgccagctgtttgatattcgcggtatgcgcgatgtaaggtcg
ctgattgcagcgcttccgccagataagcggatgctcattatgtttcgcgaagatacggcg
gatgcgttaggaatcggagcatataaagaagagatttattatgccgcctcagcggaagaa
gcatcgcggctttgtttagatggccgctatgtggtgctgttggatatgcctccgtctttg
gaaatgataaaaatgttattacgttctagtttacctgcacgcatttatgcgttattctat
caaagggagactcattttttccgcacgttgccgacgcgtgaacattttaagtggttttac
gcgtttttgcggaagcggggcatgtttaatttggcgaaacacggcggagagttggcacgt
gcgcgtggctggacggaagaaaccgtctggtttatggcgaaagtgtttcttgaactggaa
tttataacgcaacgggatggcatcgtatcgcttgttcctcagccggctaagcgagattta
agcgaatcgccgacttatcgcttgaaacaagctcagtatgagctggaaagtcttttttta
tattccacatatgaacaattaaagcggtgtctttttgaaatgaaaggtttgcacacatat
gaggaggcaaatgcataa

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