Planktomarina temperata: RCA23_c05380
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Entry
RCA23_c05380 CDS
T03229
Symbol
tufB
Name
(GenBank) elongation factor Tu (EF-Tu)
KO
K02358
elongation factor Tu
Organism
ptp
Planktomarina temperata
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ptp03012
]
RCA23_c05380 (tufB)
03029 Mitochondrial biogenesis [BR:
ptp03029
]
RCA23_c05380 (tufB)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptp04147
]
RCA23_c05380 (tufB)
Translation factors [BR:
ptp03012
]
Eukaryotic type
Elongation factors
RCA23_c05380 (tufB)
Prokaryotic type
RCA23_c05380 (tufB)
Mitochondrial biogenesis [BR:
ptp03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
RCA23_c05380 (tufB)
Exosome [BR:
ptp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RCA23_c05380 (tufB)
Exosomal proteins of breast cancer cells
RCA23_c05380 (tufB)
Exosomal proteins of colorectal cancer cells
RCA23_c05380 (tufB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
cobW
Motif
Other DBs
NCBI-ProteinID:
AII86098
LinkDB
All DBs
Position
577907..579082
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AA seq
391 aa
AA seq
DB search
MAKEKFERSKPHVNIGTIGHVDHGKTTLTAAITKQFGDFKAYDEIDGAPEEKARGITIST
AHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVNAADGPMPQTREHILLGRQ
VGIPYMVVYMNKVDQVDDDELLELVEMEIRELLSSYEYPGDDIPVIAGSALAALEDRDAA
IGSESIAKLMAAVDEYIPTPARAVDQPFLLPIEDVFSISGRGTVVTGRIERGVINVGEEI
EIVGIRDTSKTVCTGVEMFRKLLDRGEAGDNVGVLLRGIDRNGVERGQILCKPGSVKPHT
KFEAEAYILTKEEGGRHTPFFANYRPQFYFRTTDVTGTVVLPSGTEMVMPGDNLKFDVEL
IAPIAMETGLRFAIREGGRTVGAGVVSKINE
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggaaaagtttgaacgctcgaaaccccacgttaacatcggcacgattggtcac
gttgaccatggtaagacaaccttgacagctgcgatcaccaagcaatttggtgattttaaa
gcctatgacgagattgacggcgcgccggaagagaaggcccgtggtattacgatttcgact
gcgcatgttgaatatgaaacagagacccgccactacgcgcatgttgattgccctggccac
gctgactatgtgaaaaacatgatcaccggtgcggcgcagatggatggtgcgatcttggtt
gtgaacgcggccgatggcccgatgccacagacccgtgagcacattttgctcggccgtcag
gttggcattccttacatggttgtttacatgaacaaagttgaccaagttgacgacgacgag
ttgctcgaattggttgaaatggaaatccgtgagctgctgtccagctacgaatatcctggc
gatgatatccctgtgattgccggctctgctttggccgctttggaagatcgcgacgcggct
attggctctgagtccatcgcaaaattgatggcggctgtggatgagtatatcccaacaccg
gcgcgtgcggttgaccagcctttcttgctgccgatcgaggatgtgttctcaatctccggc
cgtggtacagttgtaactggccgtattgagcgcggtgtgatcaatgtgggcgaagagatt
gaaatcgtcggcatccgtgacacatcgaaaactgtctgcacaggcgttgaaatgttccgc
aaactgctcgatcgcggtgaagctggcgacaacgtaggtgttctgctgcgcggcatcgac
cgcaatggcgttgagcgcggtcagatcctgtgtaagccaggttctgtgaagcctcacacg
aagtttgaagccgaagcctatattctgaccaaagaagaaggtggccgtcacacgccattc
ttcgccaactaccgtccacagttctacttccggaccaccgatgtgaccggcacagttgtt
ctgccttcgggtactgaaatggtgatgccaggtgataacctcaaattcgacgttgagctg
atcgccccaatcgccatggaaaccggcctgcgcttcgccatccgcgaaggcggccgcacc
gtcggcgccggtgtcgtatccaaaatcaacgagtaa
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