Planktomarina temperata: RCA23_c15060
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Entry
RCA23_c15060 CDS
T03229
Symbol
xerD
Name
(GenBank) tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
ptp
Planktomarina temperata
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptp03036
]
RCA23_c15060 (xerD)
Chromosome and associated proteins [BR:
ptp03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
RCA23_c15060 (xerD)
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GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_5
Phage_int_SAM_4
Motif
Other DBs
NCBI-ProteinID:
AII87044
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Position
complement(1620585..1621505)
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AA seq
306 aa
AA seq
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MSLSWISLFLEAQVADFGAARNTQEAYGRDLKDFLAYLEARGAEFATATRPMVEDYLVHC
EAAGLATATKARRLSAIKQLYRFAFEEELRKDNPAIQVRGPGKDKHLPKSLGHDEVDQLL
LQARKMPEKRHDKLRLTCLMELLYATGMRVTELVSLPAEAVRGNPQMILVRGKGGKERMV
PLSPAAREATQVWLTLRDSDPVTEKSTFLFPSRGKLGHLTRIWFFQQIKKLAICAGIDPI
NVTPHTLRHAFATHLLAGGADLRAIQTLLGHADIATTEIYTHIQEERLRELVLEHHPLAH
PLKTGL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgtcatggatttcccttttccttgaagcgcaagtggcggatttcggtgccgcg
cgcaatacgcaagaggcctatggccgcgacctgaaagattttctggcctatcttgaggcg
cgtggcgcggaatttgcgacagccacacgcccaatggtcgaggactatctggtgcactgc
gaggccgccggtcttgcaaccgccaccaaagcccggcggctctcggcaatcaaacagctc
taccgtttcgcctttgaagaggagctgcgcaaagacaaccccgccattcaagtcagagga
ccaggcaaggacaaacatctgccaaaatctctgggtcatgatgaggtcgaccagctgctg
ctgcaggcaaggaagatgccagaaaaacgccatgacaagctgcggttaacctgtttgatg
gaacttctttatgcaacgggcatgcgggtgacagaattggtcagcctgccagccgaggcg
gttcgcggcaatccgcagatgattttggtgcgcggcaaaggcggcaaagagcgtatggtg
ccactttccccggcagcccgcgaggcgacacaagtttggcttacgctgcgggactccgac
cctgtgacggaaaaatccacctttctctttccctcacgcgggaaattaggccatttgacc
cgcatttggttttttcagcagatcaagaaattggcgatttgtgctggtattgatccgatc
aacgtcacgccgcatactctgagacatgcgtttgccacccatttactggctggtggcgct
gatttaagagctattcaaacgcttttaggccatgcggatattgcgacaacagagatttac
acgcatatccaagaagaacggttgcgcgagctggtgttggagcatcatcccttggcacac
cccttgaaaacaggtctgtga
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