Planktomarina temperata: RCA23_c15330
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Entry
RCA23_c15330 CDS
T03229
Symbol
recG
Name
(GenBank) ATP-dependent DNA helicase RecG
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
ptp
Planktomarina temperata
Pathway
ptp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RCA23_c15330 (recG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptp03400
]
RCA23_c15330 (recG)
Enzymes [BR:
ptp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RCA23_c15330 (recG)
DNA repair and recombination proteins [BR:
ptp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RCA23_c15330 (recG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecG_dom3_C
RecG_wedge
ResIII
tRNA_anti-codon
AAA_30
SecA_DEAD
IstB_IS21
HHH
TsaE
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
AII87071
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All DBs
Position
1649883..1651973
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AA seq
696 aa
AA seq
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MSTRPEILFPLFAELSTLAGVGEKSAKAFSGLKITKPRDVIFTLPHSVVDRRVVQSVQGL
AAPQTLSVLVRVVKHIPARVRGKPYRIIVEDAQSTIELIFFHARGDYLELILPLGEERLI
SGKLEVFDHRAQMVHPDYILTPEAQDELPQFEPVYPLTAGVSGKLMAKAVRSAMDKLPDL
PEWIEPSVLRDNGWPDLTTAVREAHAPKGAADVAAHSPARARLAYDEFLAHQLTKAIARA
QARVKTGRITAGTGQLQSKVLEQLPYAPTGAQRQAISEIGADMASPRRMNRLLQGDVGAG
KTLVGFIALLQAVESGGQGVLMAPTEILARQHLEGLRPLADRAGVRVDMLTGRDKSSARR
QKLEDLTSGAIDILVGTHAVFQEQVAFKDLRLSIIDEQHRFGVQQRLALGAKGTKVDVLV
MSATPIPRSLELAQYGDMDVSTLYEKPPGRKPITTAAVPLSRLADVISKLKAAIASGRQA
YWVCPLVEESETIDLTAAEERFKTLRAALGDGAVGLVHGQLPPSEKDAAMADFVAGKTKV
LVATTVIEVGVDVPNATIMVIERAENFGLAQLHQLRGRVGRGEAASTCLLMYQAPLSKSA
ERRLGIMRDTEDGFRIAEEDLKMRGAGDVIGTAQSGLPRFKVANLEHQSALMATAHQDAR
MLLQSDPALTSSRGKAARILLWLMEQDQAVHLISVG
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgcgccccgaaattcttttcccgctttttgcggagctcagcacattggctggt
gtgggcgagaaaagcgccaaggccttttctggactgaaaatcaccaagccacgcgatgtg
atttttaccctgcctcattcggtggttgatcggcgggtggtgcaaagcgtgcaaggtttg
gcggcgcctcaaacgctgagtgtgctcgtgcgggtggttaaacatattccggcccgggtc
cgtggcaagccttatcggatcatcgttgaggatgcgcaaagcacgattgagttgatcttt
ttccacgcgcgaggggactatctcgagcttatcttgcctctgggtgaggagcgattgatt
tctggcaagctcgaggtgtttgatcaccgcgcccaaatggtgcatcccgattatattctg
acacctgaggcacaagacgagctgccccaattcgagccagtctatccgctcaccgccggg
gtgtcgggcaaactcatggccaaagctgtgcgttcggccatggacaagctgccggatttg
cccgaatggatcgagccgtctgttctgcgtgacaatggctggcccgatcttacgaccgcc
gtgcgcgaagctcatgcgcccaaaggcgcagcggatgtggccgcccatagcccggcacgg
gcgcgcttggcctatgacgaatttttggcccatcagctgaccaaggcgattgcgcgggcg
caagcgcgtgttaagaccgggcggatcaccgccggtacgggtcaattgcagagcaaggtt
ttggagcaactgccctatgcccccacaggagcgcagcgccaagcaatttctgagattggg
gcggatatggccagcccccggcgcatgaaccggctgctacaaggtgacgtcggggccggg
aaaaccttggtgggattcatcgctttgttgcaggcggtggaaagcggcgggcagggggtc
ttgatggcgccgacagagattttggcccgccaacacttagaagggttacgtcctttggct
gatcgtgctggggtgcgggttgatatgctcaccgggcgggacaaaagcagcgcacgtcgt
caaaagctcgaggatttgaccagtggcgcaattgatatccttgtcggcacgcatgccgtg
tttcaagagcaggttgccttcaaagatcttcgcttgtcgatcattgatgagcagcaccgc
tttggggtgcagcaacgcctggcattgggcgcgaagggaactaaggtagatgtgctcgtg
atgagtgccacgccaatcccccgatctttggagctcgcgcaatatggcgatatggatgtc
tcgacactttatgaaaagccgcccgggcgcaaacccatcaccacggccgcggttccgctg
tcgcgtttggccgatgtgatttctaaattaaaggccgccattgcttcgggccgccaagcc
tattgggtgtgcccattggtcgaagagagtgaaaccattgatttaaccgccgcagaagag
cggttcaaaaccctgcgcgcggccctgggtgatggggctgtcggcttggtgcacggtcaa
ttgccaccctcagagaaggatgccgcaatggcggatttcgtggcggggaagacaaaggta
ttggtcgccaccacggtgattgaggtgggggtcgatgtgcccaatgcgacgatcatggtc
atcgagcgtgcggaaaattttggactggcacagctgcatcaattgcgcggacgcgtgggg
cgcggtgaggccgcctcgacctgtttgttgatgtatcaagctccgttgagcaaatctgcc
gagcggcggctgggcattatgcgagataccgaggacgggttccgtattgctgaggaagat
ctgaagatgcgcggggctggggatgtgattggcaccgcacaatcgggcctgccgcgattt
aaggtcgccaatttggaacaccagagcgcattgatggccacagcacatcaagacgcgcga
atgctgctgcaaagcgatccggcccttacgagcagtcgcggcaaagcggcgcgtatcctg
ctttggctgatggaacaggatcaggccgttcatttaatatcagtaggttaa
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