Planktomarina temperata: RCA23_c25080
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Entry
RCA23_c25080 CDS
T03229
Name
(GenBank) ABC transporter, ATP-binding cassette protein, ChvD family
Organism
ptp
Planktomarina temperata
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
ABC_tran_Xtn
AAA_22
AAA_29
MMR_HSR1
AAA_23
AAA_16
DLIC
RsgA_GTPase
NB-ARC
AAA_15
cobW
DO-GTPase2
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AII88027
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Position
2654128..2655756
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AA seq
542 aa
AA seq
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MDGVSKTYPGGKKCFENIRLSFLPGVKIGVVGVNGAGKSTLLKIMAGLDTDFSGEAWAAE
GAKVGYLPQEPKLEEGLTVRENVMLGVKAKKDILDRYNDLAMNYSDETADEMAQLQDEID
ANNLWDLDAQIDVSMEALRCPPDDAMPENLSGGEARRVALCRLLLEQPDMLLLDEPTNHL
DAETIAWLQKHLIDYTGTILVVTHDRYFLDDITGWILEIDRGQGVPYEGNYSAWLEQKAK
RLAQESREDKSKQKTLERELEWMRQGQKARQAKSKARIAAYNDMANQSEREKLGHAQIII
PNGPRLGSKVIEVSGLKKAMGDKLLVEDLSFSLPPGGIVGVIGPNGAGKTTLFKMLTGQE
QPDEGTVDYGDTVQLSYVDQSRDDLDPNANVWEAIADGLDVVQLGDVEVNGRAYCSAFNF
KGATQQKKVSLLSGGERNRVHMARLLRAGGNVLLLDEPTNDLDVETLRALEDALVDFAGC
AVVISHDRFFLDRICTHILAFEGDAHVEWFEGNFEDYEEDKKRRLGADALQPTRIKHKKF
AR
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggatggcgtttcaaaaacttatcccggtggcaaaaaatgtttcgaaaacatccgcctg
tcgttccttcctggcgtgaaaatcggtgtggttggggtgaatggcgccgggaaatcaacc
ctgctcaagattatggccggcttggatacagatttttccggcgaagcctgggcggcagag
ggcgcgaaagttggctacctgcctcaggagccgaaactggaagaaggcctgaccgtccgc
gagaatgttatgctgggtgtgaaggccaaaaaagacatcctggatcgttacaatgatctg
gcgatgaattactccgatgaaaccgccgatgaaatggcgcagctgcaagatgaaattgac
gccaataacctttgggatttggatgctcaaattgatgtgagcatggaggctctgcgctgc
ccacccgacgatgcgatgcctgaaaatctttcaggcggtgaagcgcgccgcgtggccctg
tgccggcttttgctcgagcaaccggatatgttgctgcttgatgagccgaccaaccacttg
gacgctgaaaccattgcttggctgcaaaaacacttgattgactataccgggacaatcctc
gttgtgactcacgaccgctattttctcgatgatattaccggctggatcctcgaaattgat
cgggggcaaggcgtgccctatgaaggcaattattccgcttggcttgagcaaaaggcaaag
cgtttggcgcaagaatcccgtgaggataaatccaaacaaaaaacgctggagcgcgaattg
gaatggatgcggcagggccaaaaggcccggcaggccaaatccaaagcccggattgccgcc
tataatgatatggccaatcaatccgagcgtgaaaaactgggacatgcgcaaatcatcatc
ccaaatgggccaagattggggtccaaggtcattgaagtctctgggctcaaaaaagccatg
ggcgacaagttgttggtcgaagatctctccttctcactgccccccggcggcattgtcggg
gtgatcggacccaatggggcgggcaagaccaccctgttcaaaatgctcaccgggcaagaa
cagcccgatgaaggcaccgttgactatggcgatacggtgcaattgtcctatgtcgatcaa
tctcgcgatgatttggatcccaatgccaatgtttgggaggcgattgcggatggtctagac
gtggtgcaactgggggatgtggaagtcaacgggcgggcctattgctcagcttttaacttc
aaaggcgcgacccagcagaaaaaagtcagcctgctctcgggcggggaacgcaaccgggtg
catatggcgcgattgctgcgcgcggggggcaatgtcttgctgctcgatgagccgaccaac
gatttggacgtggagaccctacgggccctcgaagatgctttggttgattttgccggctgc
gctgtggtcatctcccacgaccgctttttccttgaccggatctgcacccatatcctggca
tttgagggcgatgcgcatgtggaatggtttgagggcaatttcgaagactatgaggaggac
aagaaacgccgcctcggtgccgatgccctgcaacccacgcggatcaagcataagaaattc
gcacggtaa
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