Pan troglodytes (chimpanzee): 450304
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Entry
450304 CDS
T01005
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr03013
Nucleocytoplasmic transport
ptr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
450304 (UPF2)
03015 mRNA surveillance pathway
450304 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptr03019
]
450304 (UPF2)
Messenger RNA biogenesis [BR:
ptr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
450304 (UPF2)
mRNA cycle factors
P-body specific factors
450304 (UPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
450304
NCBI-ProteinID:
XP_016818121
Ensembl:
ENSPTRG00000002291
VGNC:
14871
UniProt:
H2Q1L9
A0A6D2WN34
LinkDB
All DBs
Position
10:complement(12089817..12212841)
Genome browser
AA seq
1272 aa
AA seq
DB search
MPAERKKPASMEEKDSLPNNKEKDCSERRTVSSKERPKDDIKLTAKKEVSKAPEDKKKRL
EDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQQEEEAAAQ
MKEKEESVQLHQEAWERHHLRKELRSKNQNAPDSRPEENFFSRLDSSLKKNTAFVKKLKT
ITEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSL
LQVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRE
SHTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNLSFPPSEIISPEKQQPFQNLLKEYF
TSLTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLL
DENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPA
ILFKDNEKSCQNKESNKDDTKEAKESKENKEVSSPDDLELELENLEINDDTLELEGGDEA
EDLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKAN
RKKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINI
ETKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPES
HLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLY
KDLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQED
VGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG
VNPDGSPSSLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLE
VWTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEESIRQVQDLEREFLIKLGLVNDKDSK
DSMTEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSDNDDDEGEEEEEENTDYLT
DSNKENETDEENTEVMIKGGGLKHVPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDV
AIPLHLKSQLRKGPPLGGGEGEAESADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWN
QQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPN
ADLIFKTGGRRR
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgtaaaaagccagcaagtatggaagaaaaagactctttaccaaacaac
aaggaaaaagactgcagtgaaaggcggacagtgagcagcaaggagaggccaaaagacgat
atcaagctcactgccaagaaggaggtcagcaaggcccctgaagacaagaagaagagactg
gaagatgataagagaaaaaaggaagacaaggaacgcaagaaaaaagatgaagaaaaggtg
aaggcagaggaagaatcaaagaaaaaagaagaggaagaaaaaaagaaacatcaagaggaa
gagagaaagaagcaagaagagcaggccaaacgtcagcaagaagaagaagcagctgctcag
atgaaagaaaaagaagaatcggttcagcttcatcaggaagcttgggaacgacatcattta
agaaaggaacttcgtagcaaaaaccaaaatgctccggacagccgaccagaggaaaacttc
ttcagccgccttgactcaagtttgaagaaaaatactgcttttgtcaagaaactaaaaact
attacagaacaacagagagactccttgtcccacgattttaatggcctaaatttaagcaaa
tacattgcagaagctgtagcttccatcgtggaagcaaaactaaaaatctctgatgtgaac
tgtgctgtgcacctctgctctctctttcaccagcgttatgctgactttgccccatcactt
cttcaggtctggaaaaaacattttgaagcaaggaaagaggagaaaacacctaacatcacc
aagttaagaactgatttgcgttttattgcagaattgacaatagttgggattttcactgac
aaggaaggtctttccttaatctatgaacagctaaaaaatattattaatgctgatcgggag
tcccacactcatgtctctgtagtgattagtttctgtcgacattgtggagatgatattgct
ggacttgtaccaaggaaagtaaagagtgctgcagagaagtttaatttgagttttcctcct
agtgagataattagtccagagaaacaacagcccttccagaatcttttaaaagagtacttt
acgtctttgaccaaacacctgaaaagggaccacagggagctccagaatactgagagacaa
aacaggcgcattctacattctaaaggggagctcagtgaagatagacataaacagtatgag
gaatttgctatgtcttaccagaagctgctggcaaattctcaatccttagcagaccttttg
gatgaaaatatgccagatcttcctcaagacaaaccaacaccagaagaacatgggcctgga
attgatatattcacacctggtaaacctggagaatatgacttggaaggtggtatatgggaa
gatgaagatgctcggaatttttatgagaacctcattgatttgaaggcttttgtcccagcc
atcttgtttaaagacaatgaaaaaagttgtcagaataaagagtccaacaaagatgatacc
aaagaggcaaaagaatctaaggagaataaggaggtatcaagtcccgatgatttggaactt
gagttggagaatctagaaattaatgatgacaccttagaattagagggtggagatgaagct
gaagatcttacaaagaaacttcttgatgaacaagaacaagaagatgaggaagccagcact
ggatctcatctcaagctcatagtagatgctttcctacagcagttacccaactgtgtcaac
cgagatctgatagacaaggcagcaatggatttttgcatgaacatgaacacaaaagcaaac
aggaagaagttggtacgggcactcttcatagttcctagacaaaggttggatttgctacca
ttttatgcaagattggttgctacattgcatccctgcatgtctgatgtagcagaggatctt
tgttccatgctgaggggggatttcagatttcatgtacggaaaaaggaccagatcaatatt
gaaacaaagaataaaactgttcgttttataggagaactaactaagtttaagatgttcacc
aaaaatgacacactgcattgtttaaagatgcttctgtcagacttctctcatcaccatatt
gaaatggcatgcaccctgctggagacatgtggacggtttcttttcagatctccagaatct
cacctgaggaccagtgtacttttggagcaaatgatgagaaagaagcaagcaatgcatctt
gatgcgagatacgtcacaatggtagagaatgcatattactactgcaacccacctccagct
gaaaaaaccgtgaaaaagaaacgtcctcctctccaggaatatgtccggaaacttttgtac
aaggatctctctaaggttaccaccgagaaggttttgagacagatgcgaaagctgccctgg
caggaccaagaagtgaaagactatgttatttgttgtatgataaacatctggaatgtgaaa
tataatagtattcattgtgtagccaacctcttagcaggactagtgctctaccaagaggat
gttgggatccacgttgtggatggagtgttagaagatattcgattaggaatggaggttaat
caacctaaatttaatcagaggcgcatcagcagtgccaagttcttaggagaactttacaat
taccgaatggtggaatcagctgttattttcagaactctgtattcttttacctcatttggt
gttaatcctgatggctctccaagttccctggacccacctgagcatcttttcagaattaga
ctcgtatgcactattctggacacatgtggccagtactttgacagaggttccagtaaacga
aaacttgattgtttccttgtatattttcagcgttatgtttggtggaagaaaagtttggag
gtttggacaaaagaccatccatttcctattgatatagattacatgatcagtgatacacta
gaactgctaagaccaaagatcaaactctgtaattctctggaagaatccatcaggcaggta
caagacttggaacgagaattcttaataaaactaggcctagtaaatgacaaagactcaaaa
gattctatgacagaaggagaaaatcttgaagaggatgaagaagaagaagaaggtggggct
gaaacggaagaacaatctggaaatgaaagtgaagtaaatgagccagaagaagaggagggt
tctgataatgatgatgatgagggagaagaagaggaggaagagaatacagattaccttacg
gattccaataaggaaaatgaaaccgatgaagagaatactgaggtaatgattaaaggcggt
ggacttaagcatgtaccttgtgtagaagatgaggacttcattcaagctctggataaaatg
atgctagaaaatctacagcaacgaagtggtgaatctgttaaagtgcaccaactagatgtt
gccattcctttgcatctcaaaagccagctgaggaaagggcccccactgggaggtggggaa
ggagaggctgagtctgcagacacaatgccgtttgtcatgttaacaagaaaaggcaataaa
cagcagtttaagatccttaatgtacccatgtcctctcaacttgctgcaaatcattggaac
cagcaacaggcagaacaagaagagaggatgagaatgaaaaagctcacactagatatcaat
gaacggcaagaacaggaagattatcaagaaatgttgcagtctcttgcacagcgcccagct
ccagcaaacaccaatcgtgagaggcggcctcgctaccaacatccgaagggagcacctaat
gcagatctaatctttaagactggtgggaggagacgttga
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integrated database retrieval system
